Gene detail

Detailed information of BRAKERHOCP00005017959.1 in Haliclystus octoradiatus

Genomic Location: :...
NR annotation: XP_047127971.1, PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5F450	PAN2-PAN3 deadenylation complex catalytic subunit PAN2 OS=Gallus gallus OX=9031 GN=PAN2 PE=2 SV=1
Q6IE70	PAN2-PAN3 deadenylation complex catalytic subunit Pan2 OS=Rattus norvegicus OX=10116 GN=Pan2 PE=2 SV=1
Q504Q3	PAN2-PAN3 deadenylation complex catalytic subunit PAN2 OS=Homo sapiens OX=9606 GN=PAN2 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20770	PAN2_N	PAN2 N-terminal	Repeat	Interproscan
PF13423	UCH_1	Ubiquitin carboxyl-terminal hydrolase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR050785	Family	PAN2-PAN3 complex catalytic subunit	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR048841	Domain	PAN2-PAN3 deadenylation complex catalytic subunit PAN2, N-terminal	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR028881	Domain	PAN2, UCH domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15728	DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000289	Biological Process	nuclear-transcribed mRNA poly(A) tail shortening	Interproscan
GO:0000932	Cellular Component	P-body	Interproscan
GO:0004535	Molecular Function	poly(A)-specific ribonuclease activity	Interproscan
GO:0031251	Cellular Component	PAN complex	Interproscan