Gene detail

Detailed information of BRAKERKREP00000000820.1 in Hydra viridissima

Genomic Location: :...
NR annotation: XP_047133136.1, glycogen phosphorylase [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERKRET00000000820

atgggTGAAAGACCACTTACTGATAGTGAAAAAAGGCGGCAAATTTCTGTTGGAAGGATTCCAACCTTAGATACTGTGAAGCATATAAAAGAAGCATTTAATCGTCATATTCATTACACTGTTGTTAAAGATAGAAATgttgcaaataattttgattactACCAAGCTCTTGTGCATACAGTGAGAGACCAGCTTTGTAGTAGATGGATTAAAACACAACAAGAATACTATAAACAAGATCCTAAGCGTGTTTATTATTTGTCACTGGAATACTATCTTGGAAGAAGTTTATCAAATATGATGACAAATTTAGGTATCTTTAATGAATGCGATGAAGCTATGTACCagCTTGGTTTGGAAATGGAAGAACTAGAAAATCAAGAAGAAGATGCTGGTTTAGGTAATGGTGGTTTAGGTCGATTAGCTGCATGTTTTATGGACTCATTGGCAACATTGGGAATTCCTGCTTATGGATATGGATTGAGATATGATTATGggttatttaaacaaaaaattcatcatgGGGAACAGATAGAAATCCCTGATGATTGGTTAAGATTTGGTAATCCTTGGGAGCACTCACGTCCTGAATATTCCATCCCTGTTCATTTTTATGGGAATGTAACATGTGATAAAGATGGGTTTCATTATTCTTGGAACAACACTAAAGTTGTCTATGCTATTGCCTATGATATACCAGTACCAGGGTATGGAAAGGACTCTGTTTGTAACACAATGAGATTTTGGTCAGCAAAATCTTCTAAAGATTTTGATTTAGATTACTttcaaaagGGGGATTATATTGCAGCTGTATTGGATCGAAATGAAGCTGAAAATATTACTCGAGTTTTGTATCCTAACGACAATgtGTTTGAAGGTAAAGAGCTAAGATTAAAACAAGAGTATCTAATGGTTTCTGCAACACTACAAGATATCATTAGACGTTTCAAGCGGGCAGATTATAATCATCAAAATATGGAAATGCGTCACGACTTATCTTTGTTTCCTgataaagtgGCTATTCAACTTAATGATACTCATCCTTCATTTGCTGTTCCTGAACTAATGAGGATATTTTTAGATGAAGAAAAACTGCCTTGGGATATGgcttgGGATTTGTGTGTGCGAACATTTGCCTACACTAATCACACTGTGCTACCAGAAGCATTAGAAAGATGGCCTGTTGATTTGATAGAAAAGGTGCTTCCTCGTCACCTCATTATCATCTATGCTATAAATCATAACTTTCTAGAAaaagtgaaaaaatgttttcctgGTGATATAGACCGTCTAAGAAGAATGTCTATGGTTGAAGAAGGAAATCAGCGTAAAATAAATATGGCTCATTTAGCAATTGTGGGCTCTCATGTTATCAATGGTGTAGCAGCTATGCACtcagagattttaaaaacatcaatctttaaagatttttatgaaatgtatCCGGAAAAATTCCAAAACAAAACCAATGGAATAACACCTCGTCGCTGGTTGCTTCTTTGTAACCCAGCTCTATCTGATGTTATTATTGAAAGACTTGGTGAAAGTTGGATAACCGATTTATCTCAACTGAAAGCATTGAGTAATCTCAATGTGAACATTCAACTCATGAAAGAATTTGAGCGTGTAAAGCAGgagaataaaatttcattggCTGCCATGATTTTGGATCAATTTGGTATAAAAATCAATGTTAACTCAATATTTGATGTGCAAGTTAAACGTATACATGAATACAAGCGTCAGCTGCTAAATGTTCTTCATATTATAACTTTGTACAAcaGATTAAAAGATAATCCCAAGTTAGACTTTGTCCCTCGAACTATTATGATAGGAGGAAAGGCTGCACCGGGATACTACATGGCAAAATTAATCATCAAGTTGATACTTGCAGTAGCAAAGGtgGTGAACTGTGACCCTGAAATTGGTGATAAGTTGAAAGtcatttttcttgaaaactaCCGTGTATCCATGGCTGAGAAAAttatacCAGCCACAGATCTTTCTGAGCAGATATCCACAGCGGGTACAGAAGCCAGTGGTACAGGAAATATGAAGTTCATGTTAAATGGGGCATTAACTATTGGAACACTAGATGGCGCAAATGTTGAAATGGCTGAGGAGATGGGCAATGAAAATATCTTCATATTTGGAATGACTGTTGATCAAGttgaagaagcaaaaaaacttgGTTACAATCCATATGTGTACTATGAAAGCAATTTGGAACTTAAGAAGTGCATTGATCAGATCAAGGGATCATTCTTTGCTCCTATTGGAACTTTTGATCATATTGCAGATGAATTGCTCAACAGAGACAGattttttctgCTTAAAGATTATGAGTCTTATATAGCTTGTCAGGACTCTATATCTCAAGTTTACAAGcATCGCGCTATGTGGTTAAAAATGTGTATCAGCAATGTGGCGCATTCTGGTAAATTTTCTAGTGACCGTACAATTATGGAGTATGCTAGAGATATATGGCATGCAAGCCCAGTTAAACTACCCGGTATAAACGgtaacaaaaatttaaagaataccaTGCAACAGCAAAGAAAACTATTCTCGCTTTACGacgtgctaaaaaaaaattataggtTGTGTTGGTGTACTCCTCGTTCACTCGCTAGTTACCCtggttttaaagaaaaaaacattttgtttacgAAACGTGATCACAATACGTACGGCTGTACAAATAGTTGCTGGAATTGTAAGTTTAAGCATGACTGTGAGCTGTTCTGTCCATCGTGCGACATTATACAATGCGGAGAATGTGCTTCTAAAcgtttgaacttttttgaacttCTCCAACTCCGCCAAAGTTTCGATATATCTGTATCtagtttaaaagattattatataaaactaCAGTCACGTCTCCATCCGGACAAATTCGTAAAAAAATCTACGAGAGAACAAGACTATTCCACTATCCATTCGGCTGTCATTAATGAGGCTCATAAAGTTCTATCAGATCCCCTTAAACGCGGGCTGTATTTGCTCGaattaaatggttttaaagTCGATGAACAATCTGTGAATAGTTCCGATAGCAACATCATCTCCTCTATCTTTGAGCTTAATTTCGAAGTGGAGGATTGCGAAGATGTTAATGATCTGAGAGCTATACTTTCAAACGTTGTCGTTGATATTGAGCATGACATTAAAGAGACAAATGTCGCTTTCGCTCaaaagaactttgaaaaagCTAGAGATGCGTTGATCAAAATGAGGTATAGAAGAACGTTAAAGCAAGTGattgaagataaaataatgGATTTGTCTTGCTAA

Transcript

BRAKERKRET00000000820

Protein

Uniprot

Uniprot term	Description
Q9XTL9	Glycogen phosphorylase OS=Drosophila melanogaster OX=7227 GN=Glyp PE=2 SV=2
Q3B7M9	Glycogen phosphorylase, brain form OS=Bos taurus OX=9913 GN=PYGB PE=2 SV=3
Q5MIB6	Glycogen phosphorylase, brain form OS=Ovis aries OX=9940 GN=PYGB PE=2 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07743	HSCB_C	HSCB C-terminal oligomerisation domain	Domain	Interproscan
PF00343	Phosphorylase	Carbohydrate phosphorylase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000811	Family	Glycosyl transferase, family 35	Interproscan
IPR001623	Domain	DnaJ domain	Interproscan
IPR036386	Homologous_superfamily	HscB, C-terminal domain superfamily	Interproscan
IPR036869	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR011833	Family	Glycogen/starch/alpha-glucan phosphorylase	Interproscan
IPR004640	Family	Co-chaperone Hsc20	Interproscan
IPR009073	Domain	Co-chaperone HscB, C-terminal oligomerisation domain	Interproscan
IPR035090	Conserved_site	Phosphorylase pyridoxal-phosphate attachment site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11468	GLYCOGEN PHOSPHORYLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0005980	Biological Process	glycogen catabolic process	Interproscan
GO:0008184	Molecular Function	glycogen phosphorylase activity	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0051259	Biological Process	protein complex oligomerization	Interproscan
GO:0004645	Molecular Function	1,4-alpha-oligoglucan phosphorylase activity	Interproscan
GO:0001671	Molecular Function	ATPase activator activity	Interproscan
GO:0044571	Biological Process	[2Fe-2S] cluster assembly	Interproscan
GO:0051087	Molecular Function	protein-folding chaperone binding	Interproscan