Gene detail

Detailed information of BRAKERKREP00000002396.1 in Hydra viridissima

Genomic Location: not available for this species
NR annotation: XP_004209451.2, transketolase-like protein 2 [Hydra vulgaris]
Species Hydra viridissima · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2NL26	Transketolase-like protein 1 OS=Bos taurus OX=9913 GN=TKTL1 PE=2 SV=1
Q9D4D4	Transketolase-like protein 2 OS=Mus musculus OX=10090 GN=Tktl2 PE=1 SV=1
Q9H0I9	Transketolase-like protein 2 OS=Homo sapiens OX=9606 GN=TKTL2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002952 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02780 all species →	Transketolase_C	Transketolase, C-terminal domain	Domain	Interproscan
PF00456 all species →	Transketolase_N	Transketolase, thiamine diphosphate binding domain	Domain	Interproscan
PF02779 all species →	Transket_pyr	Transketolase, pyrimidine binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009014 all species →	Homologous_superfamily	Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II	Interproscan
IPR020826 all species →	Binding_site	Transketolase binding site	Interproscan
IPR051424 all species →	Family	Transketolase-like	Interproscan
IPR005475 all species →	Domain	Transketolase-like, pyrimidine-binding domain	Interproscan
IPR029061 all species →	Homologous_superfamily	Thiamin diphosphate-binding fold	Interproscan
IPR033248 all species →	Domain	Transketolase, C-terminal domain	Interproscan
IPR005474 all species →	Domain	Transketolase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43195 all species →	TRANSKETOLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0004802 all species →	Molecular Function	transketolase activity	Interproscan
GO:0030976 all species →	Molecular Function	thiamine pyrophosphate binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKREP00000002396.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.