Gene detail

Detailed information of BRAKERKREP00000003817.1 in Hydra viridissima

Genomic Location: not available for this species
NR annotation: XP_047123246.1, adenine DNA glycosylase-like isoform X2 [Hydra vulgaris]
Species Hydra viridissima · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q99P21	Adenine DNA glycosylase OS=Mus musculus OX=10090 GN=Mutyh PE=1 SV=2
Q8R5G2	Adenine DNA glycosylase OS=Rattus norvegicus OX=10116 GN=Mutyh PE=2 SV=1
Q9UIF7	Adenine DNA glycosylase OS=Homo sapiens OX=9606 GN=MUTYH PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005472 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14815 all species →	NUDIX_4	NUDIX domain	Domain	Interproscan
PF00730 all species →	HhH-GPD	HhH-GPD superfamily base excision DNA repair protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044298 all species →	Family	Adenine/Thymine-DNA glycosylase	Interproscan
IPR029119 all species →	Domain	Adenine DNA glycosylase, C-terminal	Interproscan
IPR023170 all species →	Homologous_superfamily	Helix-hairpin-helix, base-excision DNA repair, C-terminal	Interproscan
IPR003265 all species →	Domain	HhH-GPD domain	Interproscan
IPR011257 all species →	Homologous_superfamily	DNA glycosylase	Interproscan
IPR015797 all species →	Homologous_superfamily	NUDIX hydrolase-like domain superfamily	Interproscan
IPR004036 all species →	Conserved_site	Endonuclease III-like, conserved site-2	Interproscan
IPR003651 all species →	Conserved_site	Endonuclease III-like, iron-sulphur cluster loop motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42944 all species →	ADENINE DNA GLYCOSYLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000701 all species →	Molecular Function	purine-specific mismatch base pair DNA N-glycosylase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006284 all species →	Biological Process	base-excision repair	Interproscan
GO:0006298 all species →	Biological Process	mismatch repair	Interproscan
GO:0016798 all species →	Molecular Function	hydrolase activity, acting on glycosyl bonds	Interproscan
GO:0032357 all species →	Molecular Function	oxidized purine DNA binding	Interproscan
GO:0034039 all species →	Molecular Function	8-oxo-7,8-dihydroguanine DNA N-glycosylase activity	Interproscan
GO:0035485 all species →	Molecular Function	adenine/guanine mispair binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0051539 all species →	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKREP00000003817.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.