Gene detail

Detailed information of BRAKERKREP00000003835.1 in Hydra viridissima

Genomic Location: not available for this species
NR annotation: XP_002165104.1, peroxiredoxin prdx-2-like [Hydra vulgaris]
Species Hydra viridissima · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A0A0K3AUJ9	Peroxiredoxin prdx-2 OS=Caenorhabditis elegans OX=6239 GN=prdx-2 PE=1 SV=1
Q90384	Peroxiredoxin OS=Cynops pyrrhogaster OX=8330 PE=2 SV=1
P0CB50	Peroxiredoxin-1 OS=Gallus gallus OX=9031 GN=PRDX1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001467 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00578 all species →	AhpC-TSA	AhpC/TSA family	Domain	Interproscan
PF10417 all species →	1-cysPrx_C	C-terminal domain of 1-Cys peroxiredoxin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050217 all species →	Family	Thiol-specific antioxidant peroxiredoxin	Interproscan
IPR000866 all species →	Domain	Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant	Interproscan
IPR013766 all species →	Domain	Thioredoxin domain	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR024706 all species →	Family	Peroxiredoxin, AhpC-type	Interproscan
IPR019479 all species →	Domain	Peroxiredoxin, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10681 all species →	THIOREDOXIN PEROXIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006979 all species →	Biological Process	response to oxidative stress	Interproscan
GO:0008379 all species →	Molecular Function	thioredoxin peroxidase activity	Interproscan
GO:0019430 all species →	Biological Process	removal of superoxide radicals	Interproscan
GO:0033554 all species →	Biological Process	cellular response to stress	Interproscan
GO:0042744 all species →	Biological Process	hydrogen peroxide catabolic process	Interproscan
GO:0045321 all species →	Biological Process	leukocyte activation	Interproscan
GO:0045454 all species →	Biological Process	cell redox homeostasis	Interproscan
GO:0016209 all species →	Molecular Function	antioxidant activity	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0051920 all species →	Molecular Function	peroxiredoxin activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKREP00000003835.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.