Gene detail

Detailed information of BRAKERKREP00000004008.1 in Hydra viridissima

Genomic Location: :...
NR annotation: XP_047128825.1, kinesin-like protein klp-20 isoform X3 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERKRET00000004008

ATGAACCACAAAGAAAGgACTCCAAGAACGTCTTCTgagaaaaagcaaaacagtTCGAGTTTAAAAATCGGGAAAGATAATGGAAGAGTAAAGGTTTATGTTAGAGTTCGTCCTTTCTTAAAAGATGAACTTAGTAAAAACAACGAGATGGCTTTCGAAATCTTAGAAAACTCGCAGttaaaagtAGCCGCTGATGAGAGAGGTCATCCTGAAAAAACTTATGCCTTTGATCACATTTTTCATCCgaacaaaacaaatgaagaGgtaTGCAAAGTACTCACAGAACCACTTATGCAAGCTGCAACAAATGGTTTTAATGGCACTCTTATGGCATATGGCCAAACTGGATCAGGTAAAACATACTCACTTATGTCGGACACTGGAATTACAAGAAGTTTAATTGACCGATGTTTTGACCATATACAGAAAGATTTAAAGCATTCTTATAAGgtTAATGTATCATACCTACAAATCtatcaagaaaaaatctttgatctATTGAACAATCAAGGAAAGGGAGACTTGGCAATACGAGAAAATCCTAAAACGGGGGTTTATGTTGAAAACATGACGGAGTATGTTGCCAGAAGTCCTGCAGAAGTTGTAGAATTTATTGAGAGCGGAAAAAAAAGACTAGTGTTTGCAGAAACAAAGATGAACAGAACATCTAGTAGGTCTCACGCAGTGTTACAAATGGCGATTGAAAGGCAACTTAAAAATGAGGatttacaagaaaaagatTATTCAATAGATCCAAaagaaataatGCAGCCACAACAAAATAGTGATACATCTTTTGGTTTGGATTTGGATTCGCTCGGAAAAGGTGTGAttattaaaggaaaaatatatatATGTGATTTAGCCGGTAGCGAAAGAATTAAACGTACGGGCGTCTCAGGAGAAAGATTGAGTGAAGCTCAGCATATTAATTCATCACTATTGGAGTTAGGCAACGTAATAGCTGCACTGGCAGATGAGAATGCATCATATATACCTTTCCGCAATTCTATACTTACTCGATTGCTTCAAGAAAGTTTGGGCGGAAACTGTAAAACAAGTTTAGTGgtTTGTGTTTCACCTGCTTTTCAAGATTTGCAAGAAACAAAGTGTACATTAAATTTTGGTCAACGCGCTATGAAAGTAAAGAATACTGCCTATGTTAATATGGAGGTCGATTTTAAAACTCTCTCAGACCAGCTTCTTAAAAAACTCGATGCTAAAGAGGAGGAAATTGAATTAATTCGCCGGCAGTGTAGTGAAGAGGTCTATCGTAAGTGCCACCATATGGAAGAAGAACTTCAAAAAGCGAAACTAGATCACGCTGAAGAACTTAAATTGCACAAAAAAGCTCTTGAAGATAAGACAATAACaatgaataaagaaattagtGCGTTGGAAAGCAAACTTGTCTTAAAAAGAAGTGAAGTCATAAGATATGAAGATTATATATTAGGGTTAAATGATGAAATCGAAAATGAAAAGCGTTTAGTGATAGTCGGAATAGAAGTTGATACCATGCTTGCAGATTTTTGTGTCAcacagaaaaataaagattttctcaaGCAAGatatcagttgtttttttgaagctaGTCGAATCCTAACTCAACATatcaaagaaattgaaaacacACTCTCTTGCCAATCTGATGTAATTGCTTCTGTCCTTGAAACACTAAAacttagtttaaatttttccaaacaTGGCGATAAACtgttaaatgacaaaaaagatgttttactCAAGAAAATAATCGAgggtaaagaaaatttaaatggtttGCTAAAAGCTGTATCAGTATTTGACGAATCTTCTCcagaTCTGCATCAGTtagtttacaaatattttcttaagaaCTATCTTCAAAAACTAATAGCATATGGGGAGTACCTATCATACAAAGTGGAGTAttctattttatcaaaaaccaatcaaagtttaacaactgaaattactcaaataaaaTCTGCCATTAATCCTGTTATTGACACACAGCTATCGTCAGCTCAGCCTAATAGCTTAAATGAgaacattgttaaaaatgaagattctATGGAAAATAGagataaaagtaattataattGTGTAATGAAAAATGCAGAAgtacaaacaaaagaaatttgtaaaaaagatacAATTAGCGTTGGAGTGCAAGCCTGCGAAGAAGATAATAAATCTGTAACAACTAACATTAGCTCTGTACCTAATTCTATTGCGGTACCTGTCGTCAATGAGTTTGATcatattgattttgtaaacGTTTTGCAACCTGTCAAATACTCATCACCTAAAAGAGTAGTTACTACTACGCTTGagaatcaagaaaaaattatcactGAGATTGAAACTGAAGATATTCTTGATAAGCCACTACctatgaaaaatacaaaatctattttttcaaactttggaACCACACTCAACAGAATTGAGGGTCTTGTAAAGACTGATCGACAAACAAAACTAGACTCACTTAATACTCGGCTCGGATTCAATTGGTATTCATCTGACTCTGACTCACGTAGACAATCTTCATTAGGCTTTAGAGAATCTTCAGAAACAACGAAAAATTTCTATCCTACAAGTTCTAAATCTTACACTGAGTCTTTTAacttgtatataaaaaatcgtAAATATTCACCTGATATTATGCGAGATAATTACAGAGAACAAACAAATagcattgatttaaaaaaactcgtCTCAATTGAAATGGAAAGTAAAGCTTTACAAAACAACTGTAAGGCACTAGAAATTGAAATCGAGCAGGTCCGGAAAGATAATCAAgagtatttaaaacttttgcaaGATTTATCCCATGTTAATGTCTTCACTAATCATTTATCAGATGTTAAAAAGCAGATACAAGAAAAATGCATACGAAAACCACAAGCTACGCAAACGGATGactattttgagaaaaaagaacCAAATAAAATTACCCAAAGTCCTAAAATTACCGCTCACGTTAAACCTCTTCAAAATAGCAATCGACCATTTTCACCTGGcagttttataaacttatcGTATGATATGAGCGAAAATGATGTTGTCACAAACATTTCTACTGTTTTCGAAATATCAGACTCCAcgtctttacaaaaaaaccaaaacggAAAAGCTCGAAGAGCTTGGGATACAAACTCTCCCAGGCGTGATAATACTTCTCCGACACCAACTAATGAAATAGAGTTTAAACAAGCAACACCCGCATActtgcaaaatgttttttccagATTAcgaaataaaagtaatgaaGAAGTTAAGTCTTCGCGAAGCCGTCCTGTTACTTGGTATGGTACTAACCACTTTGATGCGTTTTTTTCTGCTAAAGATGGAGAATATAAGAGcaatgaaacaaaaatcttaaaggAAAGTTACTCCATTATGGAGGAAGATGACCTTAAACTACATTCCAACAACAGATGGTTCGATAGCAGACGAAATACGAACGTTTAA

Transcript

BRAKERKRET00000004008

Protein

Uniprot

Uniprot term	Description
Q965T6	Kinesin-like protein klp-20 OS=Caenorhabditis elegans OX=6239 GN=klp-20 PE=1 SV=1
P35978	Kinesin heavy chain OS=Strongylocentrotus purpuratus OX=7668 PE=2 SV=1
O15066	Kinesin-like protein KIF3B OS=Homo sapiens OX=9606 GN=KIF3B PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR019821	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR027640	Family	Kinesin-like protein	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47968	CENTROMERE PROTEIN E	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan