Gene detail

Detailed information of BRAKERKREP00000004083.1 in Hydra viridissima

Genomic Location: :...
NR annotation: XP_012554166.2, centromere-associated protein E isoform X1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERKRET00000004083

ATGGCGGAggatattaaaataatttttcaacacGATGATGACAGCGATGAAGAACTTTCTAAATCAACTCCAGgtgtTATAAGGCAGTCACCAATTGCAAATAGAGATGGATCTTTATCATCACGAATTCCACGATTTAATCGTCGGGCatctgaaaatattgaaattttgaaatacacAACAGGCAGCATAAACTTAGATTCTCCTTCTGCCATTTTTAACCAACCATTTGAAGCAGATCCTCGTAACTTTCGATACAAGTTTAAACGCAAtagtatttttgaagaaagtatCTCACAGAATAATGGGAGTATAAACTGTTCTTCACCTAATAACATAAGTGCATCATCAGTTACAGATAGTCAAGGTTTTCTTCGATGCTCAGCTGTTGTGAAGCGTAACAAATCTTTTACTGAAGGAGATAGACCAAtcataaagaaacaaaaaagcacTAAAGATAATACAGCAATTAGAATGccaacaacaaatatttttggtgaTGAATTTACAACTTCATTGTCATCAAGAGCTACCTCAAGCAGTAAGCTGTCAAGAACGAAATCTTTCTCTACAATAGATATGGCTAAAAAAGAAGGTACTTTTAATTGCAGTGCAGTTGTCACTCCTCATAATACAAAAGtcTCATCGTCAGCTTTCTTAAGCAGCTTGTCAagaacaaaatctttttcttcatttgatCAAGTACAAAGTGATGGCATACTCAGTGCACGTCTTGCTACTAATACACGAGCAGTTAAAGATCCTGGTAGAGTTCAAGTTTTTGTTCGTATACGACCTCCAAATGAAAGTGAAGATATTAGTAAACATCCAATTGCTGTTTGTATAGAGGATGAGGAATGCACTCAGCTAAAATGCTTTGATGGAAAAAATGATAGATGTTATCAGTTTGATGGAGTGCTTCCTGAAAATTCAGATAACAAAGAAGCTTTTAAACATGTTGCAGAACCTCTTGTATATTCTGCTTTGTCAGGTTTTAATGGCATCCTCATGTGCTATGGACAAACAGGAACAGgcaAAACACACTCTCTTATGTCAAATGATGGTATGACAGTCCGAATAGTATACAAGTGCTTCAAAGTTATCAATCATGACAAAAAGCATAAGTACACTGTGACTTGCTCATACCTTCAAATTTACCAAGAcaagatttttgatttgttaaatgaaaCAAGAACCATTGAACTATCTCTGAGAGAGCACCCAAAAACAGGTGTATACATTGAAAATCTCACCGAGTATGTTGTTCATTCTCCAAAGGAAGTACTAAACTTGTTGAAAGTTGGGAAGCAAAGACTTGTATTTGCAGAAACTAAAATGAACAGAGCATCAAGCAGGTCACATGCAATATGTCAACTAAAAATCTTGAAGGAACGTGTAATTTCAACAAATAGTCCTAATGAAGTAAGCTCTCCATCATTAGGTGTAAAAACGCCAGACACAGATGATATCGATGATGATTTTTATGAGAATGACCAATTAGGAGGAAGCATGaatacAAGTTATCAGTCCTTAATTGAAGATGATGGTGATATTGATGACATTGCAAATCAGGTAACAGATCTTGAAGATGGTGTTACTTCAGTTCGTGGAAAAATGTACATATGTGACTTAGCAGGTAGCGaaagaataaagaaaacaCAAGCTGCAGGAGAACGTTTACAGGAAGCACAGCATATTAATTCATCTTTGCTTGAACTAGGcaATGTAATTCAGGCATTAGCAGAAGGCAATAAAACACATGTACCTTTCCGTAATTCAACATTGACTAGACTTTTACAAGAGGGTCTTTCAGGAAACTGTAAAACTCGTTTAGTTGTTTGTATTGCGCCAACTGTTAAAGACTTGCATGAGACAAAATGCAGTTTAAACTTTGGTTCGCGTGCCATGAAAGTGCAAGTTATGGCACATGTTAACTATGAAGTTGATTACAAAAGGCTAGCTGAAGCTCTAGCTGCTAAGCTGGAAAACCTAGAACAAGGCTGGAACTTGCAAAAAGATGATTATGAGAAAGTAATTGCACAGCTAAAAATGGAAGTTGTTGCAAGAAGATTTGCTTCCCCAATGaatgcaTCAAAACAAACCTCCACTGCTTCAAAACAAGTGCAAGCTTTATTAGTAGTTGAGTTAATGACTCTTCATTTATTCTACAACTTTCAACACAGAGCACTTGAATCAAGCTCAAATACACAGTTTATTCCTTCTAACCAAGATTTAGTATTGCAATGCATGGAAGGGCTCCTTGAGCTTTTAGAAGATTACCTAAGTGAAAGATTGTCCTATCGTTCCAAAATCAACTCAAACTATTCAAGCTGTAACTCATCAGTAGTAATGAGTCCAGATTATCTGGAGTCCAGTGCATCAACAATTAATGACATTCCTCATACACTAGAGCCAATGGCACGATTTATTGAACATGCACAAATCACATGTGCTAATGCCTCTAACAAGAAGTTATCTGTATCACGTGAAACAAAAGAACGTTTTAAAAGAGTAATGAATTGTTTGCTTCAGTTAAAAGAAACAGTAAATCAGAATGCtgtcaaacatttaaaagaaacttttgaagACTCTATGAAAgatactagttttctaaatttaaatcgCTTAGATGACTTGGTTGCATTACTTGACAAGCATAAAGatttgatttcaaactATGAGCAATTTGATGATTTACAAGCACTGGAGAGTTCTTTGTATTACTTACTATTTGATAAAGCTTTATTAAGTTGTCTTGTTTTGCTGAAAGCTCAGTCAGGGGATTTACTAGACGGATGGAGATGTGGTGTTCCTTCTGTTGATGACATCAGTGTGGATGTAAATCGAATTATGGAAGAATTGCgcttagaaaaaaatactactGGTAGACTTCAAGAGGAGTTATTTATATTGCGTAAGGAGAAAGCTGTAGCAgaagaaaaacttaatgaaatagAATTAGATCTAAAAACAGTACGTGAGTTGAAAGAGAAATTGGAAATCAAACTTTGTGCTGTTAACAACAGAAATCAAGTCTTAGAAGAGCTCATTGAAAAGACACAActtgaaaaggaaaaaatggaGAAACGACTTAACGATCTTGACATCCATCAATCCCAGCTTGAAGCTAGTTTAAAAGTtagtgataataataatgcgCGAAAAGAAAGATTGATTGTGGatttaaagaatgaaaaaGTCGCTTTGGACAGTTTACTTTCTACTTTGAAAGAAGAACTTTCTATTATGGAGAGAGAAAAGTCAAGagaaaacgaagaaaaaaggCACATACAAGAGGAATTGGAGGATGTCCGAGATCGTAACATCATCCTAGAAACAGAATGGTCATGTTGTCGAGAAGAAAATGGATTGTTAGAAAATGAACTTACAGCTCTGGAAGAAGATAAAGCATTTTTGGAAGAAGAATTGGTAAAATATCGAGAAGATGTCAGAATGTTAGAAGAGGCAGTAAGTGTTTTAGAAGCACAAGCATCTGACTATAAACATgatattgataatttaaaagcaaaagaagaAAGGTTGCTTAGTTGTGTTCGCTCagagaaagaaaagtttgctaaagaaattaattcGTTAAGGCAAGAAATGTCAGCATTAAGAGTGGAGCGAAGACGATTTCAGCGAGATATATCCCTCGCTAGAGCCGACAAGTCAAACACTGAACGAGCATATACTGCACTGAAAGGACAAAAGGAATCTATTCAAGATGACATTGCAAGTTATAAACAAGTTGAAAAGCACCTACAGCGTGAACTTgcctcattaaaaaatgagcgTTTAAAACTTGAGCGCGAGgtgaatactttaaaaacagaaaataataaactaaaacaagAAGTTATACTTGCAGACAAAATGAAGTCCGAAATAACCATGCTCcacaaaaatgaagaaaaaattttgcaaatatttaacttGGAAAAAGAGAAGTTCGTAGAGCAGCTATCACTATTCAAGGAAAAGTTTGACCAGTTGGAGGCTGATTTTAGTAAAGTTTCTTCTGAGAAAGAACggcttttaaaacaattaaaccaGTTTGAGCATAACGAGCAGCGCGAAGCGTGTATAGCGCGCCGCGCACAAAGCCAACCGACATCAGTGGCCTCAATCTCTTCTACTCCAGacaaagtaaaacatttttctgtgCAAGGAGCTCTCTTAAGAAGAAGTGTGCATTCAGGTGAAGTCTCTGAAATAGAAGGTAGAGTATTGGATTTACAAAGGCGATTGGCATTCTTTATGGCAGAAAAAGAAGACATTCAAAAGGAGTTGATTACATCTAGGGAAAGAAATGCAAAACTTACATCTGAAATAAGAGTTCTTGAGGAAGATACTGCTAAATTTCAGACACTCATTTCGACGTTAGGTGATGAAAAGCTCTCCATAGAATCTAAACTAACCGAGTCAATAAAGTCGAAAGACATTCTTGAGCAAGAAAAAGAGGTCCTGGAAGCAACAGTAGAAATTGCGAAAAACGCAGCAGAAAAGCTACAGAATGAACTTGataatgttttagaaaaaaaccagCTCTTGGAAATGGATCAGCTTAATGTCCGTGAAAgtttaagaattttacaaaaagaaactgTCATTCTGCAAACAGAAAATAAGCATGTAAAACAAGAGTTTGAAAAGCTGGAGGGGGAGTTGAAAGAAACGCGTGTGATTGCGGaaactcttaataaaaagGTTGCcagtttaaaagataaagtgGTAAAAGCTCGTAATGGTCAAGAAACTATAAAGGAAAAGCTAGCATCATTAGAGTCAGAAAACGTCAGTCTTTCTGATCAACTACACGTATGTCAAGTGGAAGAAGAATCCATATTATCTGAGCTAAAGGTGCTTAACAAAATGCTAAACgagcttttgttaaaattcgaaaaaaatgataaagacaAAGCAAATGAGgacGTTATCCATGAAGAACCGACCTCCTTACTAAAGCAATCTATCGTCGaattaaagtcaaaatttgAAGCGATTGTTTTAGTtgctgaaaaactaaaagaagaaCGTGAGGAACTTCAAGGACTTCTTAAGGACAATTATTCGaatgGGTCTCTCATAGAGAACATGATGAGTTTCAAAACTCGCTTAGTGGAAGTCAGTGaagaaaaattggttttaGAGAAGAAGTTACTGACCATTGAACGACATCTTGTTTCTAACAATCAAAACAATCAACACAAGGATGGCACTTCAGCTTACCaagagaaaatttatttcaagcaaagcattgaaaaacttgaacaGCAGATCGAAGAGCATATACGAGAGCAAAATCAACTCAAATCGGAAACTGAATatctgaaaaatcaaaatgctgAATTGCGCAAAGAAATTGCCATCATTTTACACGAAAATACTaaacttgaaaacaaaattgagcAACTGGAAAGTTTATATGTTAAACAAGAATCTGAATTGGTTTTAGCAACTGGAAAAACCGAAGAACTATTAAGGCAATTATGCGCGACAGAGGGGCGTAATTTAGATTTGTGCACCCAACAATATACTCAACAAGAACATTTAGAAGAATCTAAGCAACTTATACaacaattagaaaaagaaaagcaaaaaatatctgAGGAAAAACTTGAATCTGAAGAGAAAATCAAAACCTTTAAGGACAAGTTAATAATGGCTGAACTTGAAATTTCACAGCTTCGCTCAAAGGTGACTAAAATGGAAAATCAAAGAGCattgatGGCGGCAGATCTTGATTCGGCGGATCGTGAACGAACAATATTGAAGAGTGAATTGCAGCAGTTAGCGAGAGCTCTTTCACCTCTTAAACGAGAAGTAACTGAGGTAATCAAAAAGCAAGAAAGTCTTAACACTGAGCAAAACGATGCAAATTTCGATATAACAAACGaagtaaaacaaatcaaaatagaTCTAAACGAatacaatattgaaaaaatggcgTTGAAGAACGAGCAAGAAGAATTAGAGCAAAGACTGAAGTTGCTTGCTCTTGAAAAAGACGAGTTGAGGAGTCAGCTTAGAAAAATTATACAGCATTTGGATGTTCAAAATGAAGAGTCGTCGAAGACTTTCTCAACTGGTTTGGAGGATTCTATTGGCTATGTAAGCGAATTGTTACGCAAGAAAGAAGATCTTTATCACACAAAAGATATTCTTCTCGAAGACCTGCAAGCTGCAAgttatgcaaataaaattttaaacctttgTGTAAATAGTTCTGTAGAGGATTTACGGTCAGCACATGAAGATCTTTGCTTAGCCACAGTCGAAAGGTTAAAGCTGAAAGATACTGAACGCCAGCTAACGCGAAATCTAACCGAAGTTAAAGAAAGTGACCGTTATCTTTCGAACGGATTAACATCTCTTCAATATGAAGTCCAGAAACTGAAAATTGACATAGAGTCTTTCGAAAACGCACAGGCGTGTTTATTGGAGGAAGTTCGATCTTTAAATACGCAACTAAACATCGCAGAAAATAATGTTGTTAATGTTGTGCACTTTAAGAGAATTAtcgaaaaaaacttgttacaaTACAAAGAGCGTAATGCGCAACTTGAAACACATTTGCGTGTCATTTACGAAGATCTCCAGGAAATGGAGCTACGAATTAATGGTACCCCATCCAAAAGCGCAAAAGTAGTGTTAGAGACTTTAGAATTgcataaacattttcaatatctCGAAGACGACCTGCAGCAATCAGAGACAGAACGTAAGAACTTTAAAGAAGACGCTGCCGATCTAATGGAAAGATGCAACGCTCTTCAAGAagagaaaactttaaacacGGTAAGTACTGGATACATTCAGCATAGTATACATAACCAATATGATATCATTACTCAATTGCAGAAAGAACGAGATACTTTAGCGTATGAGAAGAAACGCTTGGAGTCAAAGTTATCTATtcaaaaaagtgataaaaaacgAATAATGGAAGATTACCGACGAATGAGTCGAAGTCTTGGAGAATACCTAAATTACAACAGCCAACTTGAAAGAAAACTCGAAGCTGTTAGACATCATTACTATGACGAAGATTTTCAATCAGTTGatcaaacaaaaactaaagaatTCTTTTCCCTGTCTCAACAGGTCACAAAGCGCAGTTCTGAGTTACTTTGTCAGTCGTGTTACGAAACAGTCAGTCGTAATTTTCTCGGTATTCATAACAACTCTCAAATGCTCGGTCAAGAGTTGTTAGAGTGTATCCACGataatttttctattgaaaCAGCAATTATTAGTTTCATTGAGCAGAAACATGATCTTGAGCAAGAGTTGGTTGCTGTGGAAACAAACCATtttcatattgaaaatttGCTAAATACCCCTACACCTTTGAGCCATCGATCTAGCTGGTTAGAATCTGAGCTTTCGATTTGTTCAGATCGAAGTTCTCGATGA

Transcript

BRAKERKRET00000004083

Protein

BRAKERKREP00000004083.1

MAEDIKIIFQHDDDSDEELSKSTPGVIRQSPIANRDGSLSSRIPRFNRRASENIEILKYTTGSINLDSPSAIFNQPFEADPRNFRYKFKRNSIFEESISQNNGSINCSSPNNISASSVTDSQGFLRCSAVVKRNKSFTEGDRPIIKKQKSTKDNTAIRMPTTNIFGDEFTTSLSSRATSSSKLSRTKSFSTIDMAKKEGTFNCSAVVTPHNTKVSSSAFLSSLSRTKSFSSFDQVQSDGILSARLATNTRAVKDPGRVQVFVRIRPPNESEDISKHPIAVCIEDEECTQLKCFDGKNDRCYQFDGVLPENSDNKEAFKHVAEPLVYSALSGFNGILMCYGQTGTGKTHSLMSNDGMTVRIVYKCFKVINHDKKHKYTVTCSYLQIYQDKIFDLLNETRTIELSLREHPKTGVYIENLTEYVVHSPKEVLNLLKVGKQRLVFAETKMNRASSRSHAICQLKILKERVISTNSPNEVSSPSLGVKTPDTDDIDDDFYENDQLGGSMNTSYQSLIEDDGDIDDIANQVTDLEDGVTSVRGKMYICDLAGSERIKKTQAAGERLQEAQHINSSLLELGNVIQALAEGNKTHVPFRNSTLTRLLQEGLSGNCKTRLVVCIAPTVKDLHETKCSLNFGSRAMKVQVMAHVNYEVDYKRLAEALAAKLENLEQGWNLQKDDYEKVIAQLKMEVVARRFASPMNASKQTSTASKQVQALLVVELMTLHLFYNFQHRALESSSNTQFIPSNQDLVLQCMEGLLELLEDYLSERLSYRSKINSNYSSCNSSVVMSPDYLESSASTINDIPHTLEPMARFIEHAQITCANASNKKLSVSRETKERFKRVMNCLLQLKETVNQNAVKHLKETFEDSMKDTSFLNLNRLDDLVALLDKHKDLISNYEQFDDLQALESSLYYLLFDKALLSCLVLLKAQSGDLLDGWRCGVPSVDDISVDVNRIMEELRLEKNTTGRLQEELFILRKEKAVAEEKLNEIELDLKTVRELKEKLEIKLCAVNNRNQVLEELIEKTQLEKEKMEKRLNDLDIHQSQLEASLKVSDNNNARKERLIVDLKNEKVALDSLLSTLKEELSIMEREKSRENEEKRHIQEELEDVRDRNIILETEWSCCREENGLLENELTALEEDKAFLEEELVKYREDVRMLEEAVSVLEAQASDYKHDIDNLKAKEERLLSCVRSEKEKFAKEINSLRQEMSALRVERRRFQRDISLARADKSNTERAYTALKGQKESIQDDIASYKQVEKHLQRELASLKNERLKLEREVNTLKTENNKLKQEVILADKMKSEITMLHKNEEKILQIFNLEKEKFVEQLSLFKEKFDQLEADFSKVSSEKERLLKQLNQFEHNEQREACIARRAQSQPTSVASISSTPDKVKHFSVQGALLRRSVHSGEVSEIEGRVLDLQRRLAFFMAEKEDIQKELITSRERNAKLTSEIRVLEEDTAKFQTLISTLGDEKLSIESKLTESIKSKDILEQEKEVLEATVEIAKNAAEKLQNELDNVLEKNQLLEMDQLNVRESLRILQKETVILQTENKHVKQEFEKLEGELKETRVIAETLNKKVASLKDKVVKARNGQETIKEKLASLESENVSLSDQLHVCQVEEESILSELKVLNKMLNELLLKFEKNDKDKANEDVIHEEPTSLLKQSIVELKSKFEAIVLVAEKLKEEREELQGLLKDNYSNGSLIENMMSFKTRLVEVSEEKLVLEKKLLTIERHLVSNNQNNQHKDGTSAYQEKIYFKQSIEKLEQQIEEHIREQNQLKSETEYLKNQNAELRKEIAIILHENTKLENKIEQLESLYVKQESELVLATGKTEELLRQLCATEGRNLDLCTQQYTQQEHLEESKQLIQQLEKEKQKISEEKLESEEKIKTFKDKLIMAELEISQLRSKVTKMENQRALMAADLDSADRERTILKSELQQLARALSPLKREVTEVIKKQESLNTEQNDANFDITNEVKQIKIDLNEYNIEKMALKNEQEELEQRLKLLALEKDELRSQLRKIIQHLDVQNEESSKTFSTGLEDSIGYVSELLRKKEDLYHTKDILLEDLQAASYANKILNLCVNSSVEDLRSAHEDLCLATVERLKLKDTERQLTRNLTEVKESDRYLSNGLTSLQYEVQKLKIDIESFENAQACLLEEVRSLNTQLNIAENNVVNVVHFKRIIEKNLLQYKERNAQLETHLRVIYEDLQEMELRINGTPSKSAKVVLETLELHKHFQYLEDDLQQSETERKNFKEDAADLMERCNALQEEKTLNTVSTGYIQHSIHNQYDIITQLQKERDTLAYEKKRLESKLSIQKSDKKRIMEDYRRMSRSLGEYLNYNSQLERKLEAVRHHYYDEDFQSVDQTKTKEFFSLSQQVTKRSSELLCQSCYETVSRNFLGIHNNSQMLGQELLECIHDNFSIETAIISFIEQKHDLEQELVAVETNHFHIENLLNTPTPLSHRSSWLESELSICSDRSSR

Uniprot

Uniprot term	Description
Q9LPC6	Kinesin-like protein KIN-UB OS=Arabidopsis thaliana OX=3702 GN=KINUB PE=1 SV=2
Q9FZ06	Kinesin-like protein KIN-UA OS=Arabidopsis thaliana OX=3702 GN=KINUA PE=1 SV=1
F1QN54	Kinesin-like protein KIF3B OS=Danio rerio OX=7955 GN=kif3b PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019821	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR027640	Family	Kinesin-like protein	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47968	CENTROMERE PROTEIN E	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11498	CENPE, KIF10; centromeric protein E	-	Chromosome and associated proteins	ko03036	deepkoala