Gene detail

Detailed information of BRAKERKREP00000005201.1 in Hydra viridissima

Genomic Location: not available for this species
NR annotation: KAI0236018.1, Homocysteine S-methyltransferase YbgG [Lamellibrachia satsuma]
Species Hydra viridissima · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O31463	Homocysteine S-methyltransferase YbgG OS=Bacillus subtilis (strain 168) OX=224308 GN=ybgG PE=4 SV=1
Q8LAX0	Homocysteine S-methyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=HMT3 PE=1 SV=2
Q9M1W4	Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HMT-2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003364 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02574 all species →	S-methyl_trans	Homocysteine S-methyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036589 all species →	Homologous_superfamily	Homocysteine-binding domain superfamily	Interproscan
IPR003726 all species →	Domain	Homocysteine-binding domain	Interproscan
IPR051486 all species →	Family	Homocysteine S-methyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46015 all species →	ZGC:172121	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008898 all species →	Molecular Function	S-adenosylmethionine-homocysteine S-methyltransferase activity	Interproscan
GO:0009086 all species →	Biological Process	methionine biosynthetic process	Interproscan
GO:0033528 all species →	Biological Process	S-methylmethionine cycle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00547	mmuM, BHMT2; homocysteine S-methyltransferase	EC:2.1.1.10	Cysteine and methionine metabolism	ko00270	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.