Gene detail

Detailed information of BRAKERKREP00000005914.1 in Hydra viridissima

Genomic Location: not available for this species
NR annotation: XP_012559446.2, SEC23-interacting protein [Hydra vulgaris]
Species abbreviation HVIRI · all data for this species · gene families

Sequence

CDS

BRAKERKRET00000005914

ATGGGCGATTCTGCAAAGAAAAGAGAACCATCTTCTGCTGCTGGGCTCTTTAGCCATTCCTTAGATAGCAATCTCTCACTCGGTAACGTTCCAACAATATTTTCTCCTGTTCCATTACCTGTAGCTGCAGTTTCTCAAAAACCTAGTGGTGAACATCAAGAAACTCTTTTATCGCCATTTCTCTCAGGATCAAGACAAATGTCACACTCTGAACATGAACGCCaagCTTTGGTATCACCATTATCAATACCTCCACCTTTACTGGAGACATCTACACCACCACCAGGATTGCAAGTATCAGCATTTTCAATATCATCACAACACAACACATTGCCACCATCTGGGTTGGGATTATCAACACCTCCATTAGGGTTGCAATTATCAGGATCTCCATCTAAACCTCAAGCATCACCACCTTACTCAGGGCTGCAAGCATTAACGCCTCTATCTGGACTGCAAACATCTGCATCACCATTAGGTTTGCAAGGAGTAAAATCTGGTTTGCAAGAAACTCCAgCTGAACACACTAGTGGTACAGCACTTGGTTCCTCAGTTTATACAAATCAATTTCTTCCAAATGTAAGGCCTTCACAAGCTGCTTCTCCACTTTCAAGTCTACCTTACAAAGTCTTTCCCCCAACAACAATTCCTCCAGATTCTTTAAATAAGCCCAGTCATCCATACTATGTCAAACAGCCGAACACAAGTGCAAAATCTCTTTTCAATGATGGAGTGCAGTTAATTGAAGGTAACCCTTTTGGAAATCAGAACCATCTTAATATTAGTGCTGGCCAATCGGTTGAATCTGCAGGAAGTGTTTATTTTACTCCTGTCATTCCTCActggttttattttaacaagagTTGGATACCATTTTCATATTATGATTCAAGAAACCTTGAGGAAGCATTTGTACAAAGATTATCTAACAAGATTGTAACTACAGATGGTGGGCGTTTTGATGTTGATTTGTCTACACTTCAGCGAAAAGCAGTATACTGGTGTGAAGCGCACTGTGAGGTTCGAAGGTGTACATGGTTTTATAAGGAAGAAAGCCTGTTCATCCCTTACAGCTCACCTATTTCCAATACTCTAGAGcTAGAATATGCCAAAATGATGCATAGTGGAATTTACAATATTAGAGTTGATATTGCACCAAATACGTTTGTAATTTTCCACAACCCAAATGTGCTTGTTCAGTATGTATCCAATGTTGAACATGTTGATTGGACTGGTGCAGATGCAAAAACACGACCAAAAGTTATACAGCGTGGACTAGGAGAGCTACAAGAGTTAATTCAGCAAGGAGAGCGAAAAGAAATTGACCATTTAGTATTTGTTGTTCATGGTATTGGTCCTGTTGCTGATTTGAAGATGCGTTCTATTGTTGAATGTGTTGAAGATTTTCGCAAAATCAGCTTGGACTTAACTTACACTCATGGATTTACTGTTGATGAGAAGCCTGCTAGTAGAGTTGAGTTTATTCCAGTTCAGTGGCACTCTTGTTTAAGGGATGACTTGCATGGAGTGgacagCCAGTTGAAGATGCTATCTTTGCCAAGTATTAGTAAGCTGcgtaattttacaaatgagACACTAACAGATATCTTGTTTTATACAAGTCCTTTGTACTGTCAgACAATCTGTGATACCATTGTAAATGAAATGAATCGCAtgtatgcattatttttatccCGAACACCATCATTTAAAGGGAAAATTTGTGTTGTTGGACACAGTTTAGgttcATGCATCTTATTTGATATTCTAGCTAACCAGaattttgaTCCGTTAGCAGTCAATCATGAATATCCATCAAAGGATTTTGAAGATagtgaattaaaatttgatgtgCAACCTTTAACCAATACTACTTTACCATCAATATCCCAGAATGCAGTGGAAAAGTTGCCATCAGTTAATGGAATACTTATGCAACTTAATCTTTTGCATCTTGAGTCTATGTTTGCTGAGGAACAGATGGATACAGAGACTCTacttcttTGTTCTGAGACTGATTTGAAAGATCTTGGTGTTCAATTTGGTCCtcggaaaaaaataatgtcttttcttaaagattttgCTCAAAGTCGAAAGGAATCCTGTAATGTTAAGCCAACCGGATCTATCCAAATGTTAAGTTGTGGAACTCAGACACATGTAAATGCAGATGaatcttttaacaaagagAGTGTACAGATGCCATACAAAAAGGGTACAGCGGGTACTGGCCAGCCATTagttaaatattcaaaattagattttttaactgataCCTTGTTTGCTTTGGGTTCACCTTTGGGGCTATTTTTGACTTGCAgAGGTGTGACCACTATTGGTCAAAATTTCAAGCTGCCAAATTGCAATCATTTCCTTAACATTTTTCATCCGGTCTATCGTTTGGAACCGCTGATAAACGAGCAAATAGATATACCTCCTGTGCTTATCCCCCATCACAAAGGAAGGAAAAGGATTCATTTAGaaattaaagagAACTTATCAAGAGTTGGGGCCAACTTAAAAACAGGATTGATAGATGCAGTAAGTCGTACTTGGTCCTCTATACATGACTTTGCACGTGCTCATACCTCTCAGCAGCAGCAGACAGTATCTCAAAGTGAAACGAGCAATATCGTCCAAGAATcTCATGATGTTGAGTTATTAAAAAGAGAGAATGATGTCGAGTTActaaaaagagagaaaatgCTTAATTTTGGTTTGATAAATGGTGGCAAACGTGTTGACTACGTTCTTCAAGAGCGTCCCTTAGAAatgttaaatgaatatttgttTGCATTGAGCAGCCACACTTGTTATTGgacTTCAGAAGATACAGCTTTGCTTctactcaaaaatatttattccaaATAA

Transcript

BRAKERKRET00000005914

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6NZC7	SEC23-interacting protein OS=Mus musculus OX=10090 GN=Sec23ip PE=1 SV=2
Q9Y6Y8	SEC23-interacting protein OS=Homo sapiens OX=9606 GN=SEC23IP PE=1 SV=1
O94830	Triacylglycerol hydrolase DDHD2 OS=Homo sapiens OX=9606 GN=DDHD2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005709 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02862 all species →	DDHD	DDHD domain	Family	Interproscan
PF00536 all species →	SAM_1	SAM domain (Sterile alpha motif)	Domain	Interproscan
PF02825 all species →	WWE	WWE domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037197 all species →	Homologous_superfamily	WWE domain superfamily	Interproscan
IPR013761 all species →	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR004177 all species →	Domain	DDHD domain	Interproscan
IPR001660 all species →	Domain	Sterile alpha motif domain	Interproscan
IPR004170 all species →	Domain	WWE domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23509 all species →	PA-PL1 PHOSPHOLIPASE FAMILY	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0004620 all species →	Molecular Function	phospholipase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKREP00000005914.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.