Gene detail

Detailed information of BRAKERKREP00000007209.1 in Hydra viridissima

Genomic Location: :...
NR annotation: XP_032914758.1, leucine-rich repeat and IQ domain-containing protein 1 isoform X3 [Catharus ustulatus]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERKRET00000007209

aTGTCTTCATTGATAGCCAGCTTAAATGAGTGTAATGAAATAGAGGATCTTATTGAAAAAGAGTTAAGGGCAATTGATATCAACTCTCTAGAGAATGATGATTATGAAAATCATCACACTGACAATGAGCTGTTTGAGgaaacaaatttttaccaaTCTTCTTTATCAGCATATATTTCAGCTCTTGCAGAAAGAGGCCACAAGACAGAGATTTTCCTTGAAAAAGTGAATGAGGAAACAAGTGatatttttaaagaagaaaaaaccaAGGCAGAACATGAGTTCAATGAAATTAAAGAGCAGATGCCcataaaagatgtttttgatgataaagatatttttgatgatgatgttTTTGATGAGATGAAATTTAAGGATAAACTCCTAAAAAAACAGAGTGTTGAAAAGAAGCTAAAAAGACAACTTAAAAGAATGATAAAAGAGTTGAAGTTTGAAGATTTACCTGAGGTTTACAGAATACAGAACAAAGAAGAATATATTACAGAgcaattaaagataaaatgtgGGGATGCAGAAGATGACCTTGAACAAAATGTTCCTACAGGAAGAGATGTTAGTATAAAACCTTGTGTGGAATTAAAGACTAAACCATTAGAGTGTGAAAGCCATTTAGAATCTATCAAGGATTTACATTTAGGCTTGGTGCAATCTAGCAGtgatttttttagcaatcCTCAATGTTTAGATTTTCattatgaaaaatcaaatattaacaATCATTTTAATCCTGAAGATTTAAACAGTGATttccttttaaataataaattaccaCTGAAGAATTCACATTCCCTTTACCCCAAATTGAGGAATGAAAGTTATTTAGATACTTCAGAACCTAATGAAGATATGGTGCTGAATTATTTAGTATCAAACAGTGAACTTCATTTAAAGTCTGCACAATCTTTCGTTATGATTAACCTAAATCCTGCAAAATCAAGAGCTGAGACTACACTTTTAAATCCTTTAGTATTAAGCAAAGATCAAGATAACTTAGAACTAAGAAGTGGGGATCTTCATTTTAATGCGTTACTATCATGTGTTGATCAAAATccaagtaatattttaaaaacttataatgataatgaagTAGATAAACAAGACAATATTGAAGAATCCAAGCTTGTCAACAATGAAAAAACAGATACttataatgataatgaagTAGACAAGCAAGACAATATTGAAGAATCCAAGCTTGTCAACAATGAAAAACCCAAGCctgttaataatgaaaaaactaagCTTGTCAATGATGAAAAAGCGTTGAATATGTTAAATGTTCTTGACAGCACTGTTTTACAAAACACTCAAGGGGATGTAATAATAGCTTCAAAATTAgacttattttcaaatgtgTCACCAAGAATTGTTAGTCTTTGTGAAGAATGGCTTATCATTTCAAGGAgatctTTGCAACATAAAACAAGAAgtgaagttttaataaatgaagaaGATATTACTGCAAATGAACCAGATCaaGTTCCTCAGCTGAGAAATAATGTTCTGTTGTACATACTTCATATGAATGATAATAACATTTCAAGTATTAATGATTTATCCATGTACTGGCTGCCAAATTTAAGTATTCTTGCATTGAATGCTAATAAcattTCAAGTGTGCCTTTGCTGGAGAATTTAATGACCCTTAAGGAAATTCATCTTGATGGTAATTTATTTTCCCAGCTAAAAGATTTGACTGGTCTATCTGCATGTAAACACCTCACAAAATTAAGTGTTAAAGAAAATCCTATATCAAGTGTATCTGGCTACAGATCCAGCATACATCATATTTTACCATATCTTAAACTTATTGATGGAGAAGAGTTTACTTCAGAGaTTAATGCCTACAGTGCACTTCTTGACATACTTTCCAGACATTTTCAAACAAGTCAGAACATTTTTGAAAcctgttttaagaaaaattctcATAATGACCTCTTAGCTGTTAGctgcaGCCTAACTCAAGAAAATGAAACCAAGAGAGCTGACAGTGCAAAAAAGATTCagagattatttaaacaatatatgtacaaaaaaaatcaattgtcAACTTCCCAGAAGAATCTAGAGTTAAATGGCATTTATCCTGAAGAATTGAATAATTGTGTGCTTCttaataaaaaggttttgtttgaTAATTCAGAAAAACTTGGTAtgataaattcaaaaacagaGTTATTTAAAGGTAATAAATATGATTTGTTtcattgtttaaattatgataaatcaaaattaaacttacaaaGTTCCTCTTTAACTCAAGATGACATTAAAACTCCTGAAGATTTCGGGTCTTTGGAAAATTACAATAGAAATCTTGAGAAAGACATGGTGCAAAATGATGATGATTCAAATGATAGTGATTTTGATTACACCCAAGAGGTGAATGTAGGCGATTTTGAATACATTGATATTCCTTGGAATCCACCTGAATTCTTTCAACAatCCAAAAACTCTCCAAATCTTTCAACGTCACATTTTATAACATCAAAGCAGTTggaaTCTGGAAGCTGTTTGTCAGTTAATAAAGTTTGGGATGCTCCAACGTCTCATTTAAGGCCAGTGTCTACTACCAACGATGACACTTGTTTCTTAAATTCACCTTCCACACAGAGCAAGTCAACTAGTTCACAAATCATACAAAAAGCTAACTCTATTACTAAAgattgGGGTTTTCTTAGTCCAACCACAACTGAATTGGTGTTAAAAAGGGCAAGAAAAATGggagtaaaaaagaaaaaagacttagatcCTTATGAAAGGTTTTATTCTACGAAAAGAAAACATGATGCGATATTGCCTTCAAAGGCTCGAGGTAAATACCTTCTAGATCTTACAAtatgttttattgaatttcATTTTCGTGCTTTCTTAAGACATTCAGCTTTTCTTGCTCTACATTTACATTCTGATACAtctatttttcatcatttatcATAA

Transcript

BRAKERKRET00000007209

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14580	LRR_9	Leucine-rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045081	Family	Acidic leucine-rich nuclear phosphoprotein 32	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11375	ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0042393	Molecular Function	histone binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan