Detailed information of BRAKERKREP00000007785.1 in Hydra viridissima

Genomic Location: :...
NR annotation: XP_002160482.2, mRNA export factor RAE1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5FVA9mRNA export factor OS=Xenopus tropicalis OX=8364 GN=rae1 PE=2 SV=1
Q9W2E7Protein Rae1 OS=Drosophila melanogaster OX=7227 GN=Rae1 PE=1 SV=1
Q7ZWF0mRNA export factor OS=Danio rerio OX=7955 GN=rae1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF04790Sarcoglycan_1Sarcoglycan complex subunit proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR006875FamilySarcoglycan complex subunit proteinInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10971MRNA EXPORT FACTOR AND BUB3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016012Cellular Componentsarcoglycan complexInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0000972Biological Processtranscription-dependent tethering of RNA polymerase II gene DNA at nuclear peripheryInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0006405Biological ProcessRNA export from nucleusInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan

TOP