Gene detail

Detailed information of BRAKERKREP00000008169.1 in Hydra viridissima

Genomic Location: :...
NR annotation: XP_047142688.1, myotubularin-related protein 3 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERKRET00000008169

ATGACCTCCATTTCCAATCAAAATGAGTTAGTTGTTTTCTCAAGTAATAATTGTCTTGAACCAGCTAGTCAAAAAGAGTTGGCTTATCCTGAGTTTCTTAGAAATGGTTTCACTCTACAAACTGGAAatgtttcagtaaaaaaagaatgtCATGTTCCATTTCCACTGCTGACAGCTGAAGTTGTCAAAGAGCACCATTTGagcaaagaaaattatattatcCTCACCAATTATAGATTGTTTGTGTGCTACAACCAATGTTTCTCTAATgttCCAGTTTGTTGTGTTGAATATGTTGAGATGAGGGAATTGCTTGCATTATATATTAATTGCAAAGATGGAAAAATCATACGAGTTACTTTTGACACTCAGGAAGACTGTTCACAGTGGTGGAGGTATATAACATCTTCTGAGGTTGCACAAACTAATCCAGAGGATTTGTTTGCATATCAACATTACATAAAGTTATCCTGGAAACCTACATGTGACTCAGctgctGACTGTGAAGCAGGGCTATTTGTTGATGATGTGCGTCGTATGGGGTTTAATACAAAATCTATATGGCGgatttctgaaataaattcCAAGTTCGAagtttgtAAAACCTATCCAAAATTTCACATTGTACCAAAATGGATTTCAGATGATGACCTAAAAACTGTTGCACAATTTCGTGCTTTGCGTAGATTTCCATCTGTCGTTTGgagGAGTAAAAAATCTGGTGCAATTATTGCACGATCAAGCCAACCAGAACTTGGCTGGTTTGGATGGCGGTGTGAAAAAGATGAACAGCTGTTGTCTGCCATATCTCAAGCAGCAAATCTTGACAGAGACAACAAAATGTTCAACATGACAGTTTCAGTGACGGACATGTCTTCTACTTCAAGGCAACCATTTTTGCTTGTTGATGCACGCTCGTATGCATCAGCTGTAGCCAATAGAGCAAAGGGAGGAGGCTGTGAATGTCAagAGTATTATCCAAACTGTGAAATACAATTTATGAATCTTCCCAACATCCATGTTATACGAAAAAGCTTTCAGAGTGTGAGGACTCTTTCTTATTTGGGAAAAGAGCAGCTTAAttgGTATTCGTCGCTTGAAAACACTCGATGGCTACAATACTTGTCAGCTTTACTGCGTGCTACATACACTATAGTAGATTCTATTAATCTTAAGTCACAATCCGTACTTGTGCATTGTTCAGATGGATGGGATCGTACAACCCAAATAGTGTCTTTGTCTGAATTGCTTTTGGATCCTTACTACAGAACTATCAAAgGTTTTCATGTTCTTATTGAACGTGAGTGGTTGGATTTTGGTCATAAATTTGCAGATCGTTGTGGCCATAGTCAAGACCGAGATATAAATGAGAGTAGTCCAGTGTTTTTACAGTGGCTAGATGCAGTATATCAACTAATACGACAGTTCCCTTCAGCATTTGAgtttaatgagtttttcttGTTGAAGCTTGTGCAGCATGTTTACAGTTGTTTGTACGGAACATTTCTGTGTAACAGCACTCAAGAGAGGCATAATAGCAAAGTAAAGTCAAAAACCCTTTCTATATGGGACTTGCTTTTATCTTGcagaaaagattttactaaTTATCTGTATACACAAGAAAATGAGGTATTGTATCCAAGTTATCATGTGAAGGATTTAAGACTGTGGGAAGCTGTTTTCACAACCACTTCTCAGCATTATTTAAAGACAACCATACAACGCAGAGACTTTATAGATATGACTCAACAGCTCGAACTTAATGACTCGGGAAATTTTACTGCTAATGGAGAAAGTTGTAAAGAAGGTAATGGCTTTACCTCCTCTTTGAATGGCTTTTCAGGCCAGCAGTTAAACCATAACTCCAACattaatgaaagttttacaaaGCAAAACGGATCTGTTATAGATGTCAATtgctttaaaagtaacaaatcgTGTTCCGCTGCCGATGTTAATTTATTAAGCATCGCAGATTTGAACGAATCAAATGATTGGAGAATAATTACCACCGTTGATAATCTAGAGGAAAATAACGAACTAACTAATGAACCcttagataaatatataaataaagatagCGAATTCTTATATAGCAATAGCAATAGCGAAGACGATTTAGAcaattctgaaaataaaagtttagataACCCAAAAATGACTGACAGTGTGCGGACACTAACTAATGAAAGCGAACGCAGGAAAAGCTTTGACGAGTCCTGTAAACCTATACAATTAGAGACAAATTTAGTTAGTTTATCTCGACACGGCAGCGGCGGAATGCGTCGAGCTCATAGCTCTCCTGAATCTCCTCCTTTATCAAGCATGCTTTCGAGGACAAAGTCATTTCCTGACGTTATGTCGTCTTCAATGGGAGCAAATGATATCAAGATTAACTCTGACTTAAATAAGCAGACAAACGTATTTCTAAAAGACCTCAGTAAGTTTTTAGATACGGATGGTTTAACTATCTCGTATTGTTTCTATGATCAGCAGCTTCTGGAAATCGCAAAAAATCATGCTCAAGAAATGAACagtgtttttaagaaattagaGATAGAGAGGCAGGCCAGGATTTATCTTCAGCAGCAACATTTTCAAAGTGGATCACCAAGTACACCTTATAACTTGCCAACTGTTTTAAATGACGACCAGCATTCATTACCAGACTCTGTGAATGGAACGCGGTCTTTATCAAGTGTAAGTAACGAAGAAGGTTGGGAACAAGTTCAATATAATGATGTGCAATCTGTCCTTTGGGTTCCTGATCATTTGTCGATTTTTTGTTCTCGTTGTGGTTGCCGCTTTTCAGTCGTCTACAGACGCCACCATTGCAGaaaatGTGGTGGAGTATTTTGTGACGCATGCTCGAAATATCAAATTTGCATTCCCGAAGAATCTTTATTCACACCTGTGCGTGTTTGTGAGCAATGTTATTTTCATTCGTCTGCCGTTCATTCAACCGTCATTTag

Transcript

BRAKERKRET00000008169

Protein

Uniprot

Uniprot term	Description
Q8K296	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR3 OS=Mus musculus OX=10090 GN=Mtmr3 PE=1 SV=2
Q5PQT2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR3 OS=Rattus norvegicus OX=10116 GN=Mtmr3 PE=1 SV=1
Q13615	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR3 OS=Homo sapiens OX=9606 GN=MTMR3 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06602	Myotub-related	Myotubularin-like phosphatase domain	Domain	Interproscan
PF01363	FYVE	FYVE zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010569	Domain	Myotubularin-like, phosphatase domain	Interproscan
IPR030564	Family	Myotubularin family	Interproscan
IPR000306	Domain	FYVE zinc finger	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR016130	Active_site	Protein-tyrosine phosphatase, active site	Interproscan
IPR017455	Domain	Zinc finger, FYVE-related	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR003595	Domain	Protein-tyrosine phosphatase, catalytic	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10807	MYOTUBULARIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004438	Molecular Function	phosphatidylinositol-3-phosphate phosphatase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0010506	Biological Process	regulation of autophagy	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0019903	Molecular Function	protein phosphatase binding	Interproscan
GO:0046856	Biological Process	phosphatidylinositol dephosphorylation	Interproscan
GO:0052629	Molecular Function	phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0016311	Biological Process	dephosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18082	MTMR3_4, ZFYVE10_11; myotubularin-related protein 3/4	EC:3.1.3.48 EC:3.1.3.64 EC:3.1.3.95	Protein phosphatases and associated proteins	ko01009	deepkoala