Gene detail

Detailed information of BRAKERKREP00000008320.1 in Hydra viridissima

Genomic Location: not available for this species
NR annotation: XP_002170794.2, dnaJ homolog subfamily C member 10 [Hydra vulgaris]
Species abbreviation HVIRI · all data for this species · gene families

Sequence

CDS

BRAKERKRET00000008320

ATGCacctatttattttaactgtattaattattaattgcaatatttgtttatctattaaaaatgattattactCCTTACTCGGCGTTAAAAGTGATGCATCAAAGTCTGAAATAagaaaagctttcaaaaaacttGCTCTTGAAAAGCATCCAGACAAaaataagggAGATGTAACTGCTCATGAgacatttcttaaaataaataaggcttatgaagtattaaaagATGAAGAACTGCGCAAAAAGTATGATAGATATGGGGAAGATGGTCTCAAAGACAATCACTTTAGTAACAACTACCAAAGCTGGACATACTATAATGAACAATTTGGCATTTATGATGATGATCCTGAAGTTATTACTCTTAGCAGATCAGATTTTGagcaaTCAGTTTCTAATTCTGAAGATATATGGTTCATTAACTTCTATTCACCCCACTGCTCACATTGTCACACTCTTGCTCCTATTTGGCGAAAGCTTTCTGAAGAACTTAGTGGGGTTGTTCGCATAGGAGCAGTAAACTGCCATGAAGACTGGATGCTGTGTAATGCTGAGGGAATCAGAGGATATCCTTCACTGCGTGTCTATCCTACTGCGGAAGATTACTATGGAGAACATgacattgaaaaaatgatactatatatttttgataaagttcaGATTGATGTAGCTTATTTGAATAATGaaaatataaatagcgTGTATGAAAGTACAATGCCTTggattatttctttttgtaaagaagATGATGACTGTTTAACTGATAGAACATTGTTGAAAGTTTCAGCCATGTTGgaaGATCTTGTTAAAGTTGGATCAGTAAACTGTGAGACAGAATCAGATCTTTGCAAACTTTTATCTCATTCTAGTGGAGTTTACTTCTATTCTGCTGAATCAATAAAAGATTCTCAAGGACTAatgatcAACAGTATGAATGCAAAAGAATTAGTCAGTGAAGTGTTAGAATTGCTTCCAATACCTCCTCAAGTTAATGACAATATGTTTCAGCAAATTCGGCgaaatatttcagaaaacaaGAGCAATGAATGGCTTTTTATGTTCACTAATGGTGATGAACATAAAAATCATGAATTACGGAAAACAGAAgcattaattcaaaatataaatATTGGCCTCGTGAATTGTTTAGAAGCTGCAGATCTTTGTCAGAGATTTCTGATAACAAAATATCCCACTGTTTtactgtataaaaaaattggttatGAAATTCATCATGGGCGTATGTTTGCTCATGACCTAGCAAATTTTGCACGAGAGAGTCTTGCATCAAATGTACGAGTAATGGGTCCAGATGATTTCCTAAAAATTTCCCAGAGTTCAGAAAGTTATTTTGTAGACTTCTTTGCACCATGGTGTCCACCTTGCATGAAATTACTTCCAGAATGGCGTAAAGcaggtaaaaaaattggtgGGAAGCTTGCACATTTTGGTACTGTTGACTGCACTGTTCATCACCAACTCTGTGTTaagttAAGCATTCACTCTTATCCAACATCAATTTTCTATAACTTGAGCAAAGCACATATTTTCAATGGTTATCACACTACAGAAGAAATAATAGAATATGCAGAGGATATCAAGAGTCCTCCTGTTGTGCAGATTACGCCAGATTTTTTCAACACTGAAATTAAGAATAAACCTATTGGAAAGACATggttattgaaattttatgcCCCGTGGTGTCATCCTTGTAATGAAATGGCCCCAGCCTATTCAAAACTTGCAAAAAAACTGAAAGGCGAAGCATTAGTTGGCGAAGTAAACTGTGATGAACAGCGGTATTTCTGTCAAAGTCTTGGTATCACAAGTTATCCAACACTAAGGCTACTTCCACATTATATAAAAGGTTATTCTGGTTTTGTACAGTACAGTGGTTGGAGAGATTTTAATTCCTTATACATTTGGGTGGTTGACTATTTCCCTACTGttgtaaaagatttcaatgaCATTGATTTTTACACCATACTAAACAGTGATGATCCGTGGTTGATAGAGTTCTACGCCCCCTGGTGTTCTCATTGTACAACGTTTGCGCCACACTTCAAGCAACTTGGAAAGCGTCTTCTTGATGAGAAAGTAATTCAAactgcaaaaataaattgtcaagaTTATTATAGTTTGTGCCGTGACGTTGGAGTTCGCAGCTATCCATCGCTCCGTTTTTATGAAGGAAGAACGCACGAAGGAATGAGTCAGCCCATTACTGGAACCGCGTTGGAATCTCAGGACACGAACTATTTGTTCGAGGTTTGCTCTCAGTTATTGGAATATCACGTCGCATCCTTAAATTCAGGAGTCGATAATTCAAACAGCGaagaattgaataaaaaatatgaagctTCTGACGAAAGgttattcgCCCACGATGAGTTCTAG

Transcript

BRAKERKRET00000008320

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8IXB1	DnaJ homolog subfamily C member 10 OS=Homo sapiens OX=9606 GN=DNAJC10 PE=1 SV=2
Q6NRT6	DnaJ homolog subfamily C member 10 OS=Xenopus laevis OX=8355 GN=dnajc10 PE=2 SV=1
Q5R5L3	DnaJ homolog subfamily C member 10 OS=Pongo abelii OX=9601 GN=DNAJC10 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005602 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00085 all species →	Thioredoxin	Thioredoxin	Domain	Interproscan
PF00226 all species →	DnaJ	DnaJ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001623 all species →	Domain	DnaJ domain	Interproscan
IPR017937 all species →	Conserved_site	Thioredoxin, conserved site	Interproscan
IPR013766 all species →	Domain	Thioredoxin domain	Interproscan
IPR036869 all species →	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR052460 all species →	Family	Endoplasmic reticulum disulfide reductase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44340 all species →	DNAJ HOMOLOG SUBFAMILY C MEMBER 10	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005788 all species →	Cellular Component	endoplasmic reticulum lumen	Interproscan
GO:0015035 all species →	Molecular Function	protein-disulfide reductase activity	Interproscan
GO:0016671 all species →	Molecular Function	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	Interproscan
GO:0036498 all species →	Biological Process	IRE1-mediated unfolded protein response	Interproscan
GO:0051787 all species →	Molecular Function	misfolded protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09530	DNAJC10; DnaJ homolog subfamily C member 10	EC:1.8.4.-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.