Detailed information of BRAKERKREP00000008709.1 in Hydra viridissima

Genomic Location: not available for this species
NR annotation: XP_047139268.1, 5'-3' exoribonuclease 1 isoform X2 [Hydra vulgaris]
Species Hydra viridissima · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8IZH25'-3' exoribonuclease 1 OS=Homo sapiens OX=9606 GN=XRN1 PE=1 SV=1
P977895'-3' exoribonuclease 1 OS=Mus musculus OX=10090 GN=Xrn1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001148 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18129
all species →		SH3_12Xrn1 SH3-like domainDomainInterproscan
PF18334
all species →		XRN1_D2_D3Exoribonuclease Xrn1 D2/D3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047008
all species →		Homologous_superfamily5'-3' exoribonuclease 1, SH3-like domain superfamilyInterproscan
IPR041385
all species →		Domain5'-3' exoribonuclease 1, SH3-like domainInterproscan
IPR041106
all species →		DomainExoribonuclease Xrn1, D2/D3 domainInterproscan

 PANTHER
No PANTHER signature was detected for BRAKERKREP00000008709.1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
No Gene Ontology signature was detected for BRAKERKREP00000008709.1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERKREP00000008709.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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