Detailed information of BRAKERKREP00000008838.1 in Hydra viridissima

Genomic Location: :...
NR annotation: XP_047124611.1, E3 ubiquitin-protein ligase parkin-like isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7KTX7E3 ubiquitin-protein ligase parkin OS=Drosophila melanogaster OX=7227 GN=park PE=1 SV=1
Q9P3U4E3 ubiquitin-protein ligase dbl4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dbl4 PE=3 SV=1
P36113E3 ubiquitin-protein ligase HEL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HEL1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF17978zf-RING_14RING/Ubox like zinc-binding domainDomainInterproscan
PF01485IBRIBR domain, a half RING-finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047534DomainE3 ubiquitin-protein ligase parkin, BRcat domainInterproscan
IPR031127FamilyE3 ubiquitin ligase RBR familyInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR002867DomainIBR domainInterproscan
IPR047536DomainE3 ubiquitin-protein ligase parkin, Rcat domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR044066DomainTRIAD supradomainInterproscan
IPR041170DomainRING/Ubox-like zinc-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11685RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0031624Molecular Functionubiquitin conjugating enzyme bindingInterproscan
GO:0032436Biological Processpositive regulation of proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04556PARK2; parkinEC:2.3.2.31
Mitochondrial biogenesisko03029deepkoala

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