Gene detail

Detailed information of BRAKERKREP00000009618.1 in Hydra viridissima

Genomic Location: not available for this species
NR annotation: XP_047134236.1, aromatic-L-amino-acid decarboxylase-like [Hydra vulgaris]
Species abbreviation HVIRI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O96571	Aromatic-L-amino-acid decarboxylase (Fragment) OS=Drosophila lebanonensis OX=7225 GN=Ddc PE=3 SV=1
P22781	Aromatic-L-amino-acid decarboxylase OS=Cavia porcellus OX=10141 GN=DDC PE=2 SV=1
O88533	Aromatic-L-amino-acid decarboxylase OS=Mus musculus OX=10090 GN=Ddc PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005722 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00282 all species →	Pyridoxal_deC	Pyridoxal-dependent decarboxylase conserved domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015422 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR010977 all species →	Family	Aromatic-L-amino-acid decarboxylase	Interproscan
IPR002129 all species →	Family	Pyridoxal phosphate-dependent decarboxylase	Interproscan
IPR015421 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR015424 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR021115 all species →	Binding_site	Pyridoxal-phosphate binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11999 all species →	GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006520 all species →	Biological Process	amino acid metabolic process	Interproscan
GO:0016831 all species →	Molecular Function	carboxy-lyase activity	Interproscan
GO:0016830 all species →	Molecular Function	carbon-carbon lyase activity	Interproscan
GO:0019752 all species →	Biological Process	carboxylic acid metabolic process	Interproscan
GO:0030170 all species →	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKREP00000009618.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.