Gene detail

Detailed information of BRAKERKREP00000009644.1 in Hydra viridissima

Genomic Location: not available for this species
NR annotation: XP_002164954.1, 60S ribosomal protein L27a [Hydra vulgaris]
Species Hydra viridissima · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P46776	Large ribosomal subunit protein uL15 OS=Homo sapiens OX=9606 GN=RPL27A PE=1 SV=2
Q5REY2	Large ribosomal subunit protein uL15 OS=Pongo abelii OX=9601 GN=RPL27A PE=2 SV=3
Q56K03	Large ribosomal subunit protein uL15 OS=Bos taurus OX=9913 GN=RPL27A PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006093 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00828 all species →	Ribosomal_L27A	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021131 all species →	Domain	Large ribosomal subunit protein uL15/eL18	Interproscan
IPR001196 all species →	Conserved_site	Large ribosomal subunit protein uL15, conserved site	Interproscan
IPR030878 all species →	Family	Large ribosomal subunit protein uL15	Interproscan
IPR036227 all species →	Homologous_superfamily	Large ribosomal subunit protein uL15/eL18 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11721 all species →	60S RIBOSOMAL PROTEIN L27A	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0015934 all species →	Cellular Component	large ribosomal subunit	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKREP00000009644.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.