Gene detail

Detailed information of BRAKERKREP00000011175.1 in Hydra viridissima

Genomic Location: not available for this species
NR annotation: XP_012559796.1, uncharacterized protein LOC105846011 [Hydra vulgaris]
Species Hydra viridissima · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Y3D5	Small ribosomal subunit protein bS18m OS=Homo sapiens OX=9606 GN=MRPS18C PE=1 SV=1
Q8R2L5	Small ribosomal subunit protein bS18m OS=Mus musculus OX=10090 GN=Mrps18c PE=1 SV=1
P82917	Small ribosomal subunit protein bS18m OS=Bos taurus OX=9913 GN=MRPS18C PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008510 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01084 all species →	Ribosomal_S18	Ribosomal protein S18	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001648 all species →	Family	Small ribosomal subunit protein bS18	Interproscan
IPR036612 all species →	Homologous_superfamily	K Homology domain, type 1 superfamily	Interproscan
IPR040054 all species →	Family	Small ribosomal subunit protein mS40	Interproscan
IPR036870 all species →	Homologous_superfamily	Small ribosomal subunit protein bS18 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13329 all species →	MITOCHONDRIAL RIBOSOMAL PROTEIN S18B	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0032543 all species →	Biological Process	mitochondrial translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKREP00000011175.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.