Genomic Location: not available for this species
NR annotation: XP_047142514.1, protein KIAA0100-like [Hydra vulgaris]
Species Hydra viridissima · all data for this species · gene families
| CDS |
| BRAKERKRET00000013461 |
| Transcript |
| BRAKERKRET00000013461 |
| Protein |
| BRAKERKREP00000013461.1 |
| UniProt accession | Description |
|---|---|
| Q9VZS7 | Protein hobbit OS=Drosophila melanogaster OX=7227 GN=hob PE=3 SV=2 |
| Q14667 | Bridge-like lipid transfer protein family member 2 OS=Homo sapiens OX=9606 GN=BLTP2 PE=1 SV=3 |
| Q5SYL3 | Bridge-like lipid transfer protein family member 2 OS=Mus musculus OX=10090 GN=Bltp2 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002345 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF10347 all species → | Fmp27_GFWDK | Fmp27/BLTP2/Hobbit, GFWDK motif-containg RBG unit | Repeat | Interproscan |
| PF10351 all species → | FMP27-BLTP2_C | BLTP2/FMP27/Hobbit, C-terminal | Repeat | Interproscan |
| PF10261 all species → | FIT | Fat storage-inducing transmembrane protein | Family | Interproscan |
| PF21675 all species → | BLTP2_RBG-6 | BLTP2, sixth RBG module | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019441 all species → | Domain | FMP27/BLTP2/Hobbit, GFWDK motif-containing RBG unit | Interproscan |
| IPR019443 all species → | Domain | BLTP2/FMP27/Hobbit, C-terminal | Interproscan |
| IPR019388 all species → | Family | Fat storage-inducing transmembrane protein | Interproscan |
| IPR045167 all species → | Family | Hobbit | Interproscan |
| IPR048872 all species → | Domain | BLTP2, sixth RBG module | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15678 all species → | ANTIGEN MLAA-22-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005789 all species → | Cellular Component | endoplasmic reticulum membrane | Interproscan |
| GO:0010945 all species → | Molecular Function | coenzyme A diphosphatase activity | Interproscan |
| GO:0019915 all species → | Biological Process | lipid storage | Interproscan |
BRAKERKREP00000013461.1.Transcript abundance of BRAKERKREP00000013461.1 across 29 RNA-seq samples of Hydra viridissima. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole body | 18 | 0 | 0.00 | 0.00 | |
| Whole | 6 | 0 | 0.00 | 0.00 | |
| aposymbioic hydra M9 strain · aposymbioic hydra rep1 | 1 | 0 | 0.00 | 0.00 | |
| aposymbioic hydra M9 strain · aposymbioic hydra rep2 | 1 | 0 | 0.00 | 0.00 | |
| symbioic hydra M9 strain · symbioic hydra rep1 | 1 | 0 | 0.00 | 0.00 | |
| symbioic hydra M9 strain · symbioic hydra rep2 | 1 | 0 | 0.00 | 0.00 | |
| unannotated | 1 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (HVIRI_TPM,
StringTie quantification over 29 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
