Gene detail

Detailed information of BRAKERKREP00000013858.1 in Hydra viridissima

Genomic Location: :...
NR annotation: XP_012560932.1, glycine-rich RNA-binding protein 10 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9ZUU4	RNA-binding protein CP29B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP29B PE=1 SV=1
P21187	Polyadenylate-binding protein OS=Drosophila melanogaster OX=7227 GN=pAbp PE=1 SV=3
F4HT49	Polyadenylate-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=PAB1 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050441	Family	RNA-binding motif	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48034	TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005681	Cellular Component	spliceosomal complex	Interproscan
GO:0048026	Biological Process	positive regulation of mRNA splicing, via spliceosome	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13195	CIRBP; cold-inducible RNA-binding protein	-	Spliceosome	ko03041	deepkoala