Gene detail

Detailed information of BRAKERKREP00000013884.1 in Hydra viridissima

Genomic Location: not available for this species
NR annotation: XP_004210536.1, 60S ribosomal protein L28 [Hydra vulgaris]
Species Hydra viridissima · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P17702	Large ribosomal subunit protein eL28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4
P41105	Large ribosomal subunit protein eL28 OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=2
P46779	Large ribosomal subunit protein eL28 OS=Homo sapiens OX=9606 GN=RPL28 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008265 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01778 all species →	Ribosomal_L28e	Ribosomal L28e protein family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029004 all species →	Domain	Ribosomal eL28/Mak16	Interproscan
IPR002672 all species →	Family	Large ribosomal subunit protein eL28	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10544 all species →	60S RIBOSOMAL PROTEIN L28	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02903	RP-L28e, RPL28; large subunit ribosomal protein L28e	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.