Gene detail

Detailed information of BRAKERKREP00000014009.1 in Hydra viridissima

Genomic Location: not available for this species
NR annotation: XP_012566866.1, corepressor interacting with RBPJ 1 [Hydra vulgaris]
Species Hydra viridissima · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8VZ67	Uncharacterized zinc finger CCHC domain-containing protein At4g19190 OS=Arabidopsis thaliana OX=3702 GN=At4g19190 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007268 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10197 all species →	Cir_N	N-terminal domain of CBF1 interacting co-repressor CIR	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019339 all species →	Domain	CBF1-interacting co-repressor CIR, N-terminal domain	Interproscan
IPR040014 all species →	Family	Corepressor interacting with RBPJ 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13151 all species →	CBF1 INTERACTING COREPRESSOR CIR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003714 all species →	Molecular Function	transcription corepressor activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0045892 all species →	Biological Process	negative regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06066	CIR; CBF1 interacting corepressor	-	Epstein-Barr virus infection	ko05169	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.