Gene detail

Detailed information of BRAKERKREP00000014278.1 in Hydra viridissima

Genomic Location: :...
NR annotation: XP_047127337.1, kinesin heavy chain isoform X3 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERKRET00000014278

atgtattatGATTATGTATTTTGGCTGAAGATTGCCAGTACACTGATAACATTACAAGATGGTAGTAAAgaagtaaaatacaaatttgacAAAGTCTTTCCACCTCactctttaaataaagatGTAACAACAAGTTTATGTGGCCCATTGGTATCATCTATTGTTAGTGGTTACAATGTCAGTTTCATTGTTTATGGACAGACATGCActgGAAAAACCTACTCAATGCTCTCTCAGGATGGAATGATACCTACAACCGTAAGCAAACTATTTGAATTTCTTGAAGGCTGCACTGAGTATGATTATTGTTTAAGCCTATCATACTTGCAAATCTATCAAGATCGCATCTATGATTTGCTTTTCAATAGTGAAAATGGTCCTCTTTCATTGAGAGAACATCCTAAAGAgggtATTGTAGTTGAGGGTTTATCAGAGACAGTGATAAAGAACACAGAAGAAGCTATTAACTTATTGGATATAGGAAAAACAAAGCTTATTTTGGATCAAGGATCAATACATTGTTCACGATCACATGCAGTGTGTATGATAACAATTAAGAAGcagtcaaaaattaattacagctcaaagaaaaagaaagtctCCAGTCAAACCAAGATAGAGAAACTGGAAAATGGTGAAGcaaatatcataaaaactaaactgTTCATGTGTGATCTAGCTGGTTCAGAAAGAATGAGGAAAGCTGATCTAGAGACCTGTTCTAGCAGAAGAATGTCTGAAGTTAAGTTTATCAACACATCACTTTTAGAATTAGGgAATGTCATTCATGCGTTAGCCTCTCAAAATGGTTATGTGCCTTTTCGAAATGCTCCTTTAACACGAATTTTGCAAGAAAGTCTTGCAGGAAATAGCAAAGCTGCAATAATGATTTGCATCTCACCATCACTGTCGAACACTAAagaaacaaagttttctttgaattttggACAGCGAGCAATGAATGTAGTTAAGTTCAGTGGATCAACATCTAatgaAGGGACAGATTATAATTTGGATACCTACAGCaagaaaagaaagGTTGACTACAAGGCCTTGGCAGAACACCTCCAGCAAAAGTTGATTAAACTGGaggatGCAtacgaaaaagaaaagtttgatatGCAGGCATTGAAGCTTTTACTTCAACAAAATTCTGATGGAAAGAAGCCAGTTGAGGAGATATTGAACCAAATCAATTTAgcgaaaaaacaatttaacagTGTTGAAACTCAAACTAGCTTTGATATGAGAAACAATAGTTATGATTTAGATATGCTCTCTGACTTTGAAGGAAAGTCTGAAAGTTTCCCTGCccaatatttaaatgataataacagtGATTCCTCTTATTACTTGAGCAAAGAGTTTGAAACCTCAGAACATCTTAATGAAGACACACATGGTTTTAATAGTACCCTGGATTTTGCAGATGGAAACACACATCAAGGtggtttgaaagaaaaagtaatagaaTCAGCTAAACATTTCTATGAGTTAAATACAAattgtttgttgaaaaaagataaagatggTGATTTTCAAGAGGCTCTGATTTCTAGAGAAGTATCATCTGAGAAGTTTACTTCTCttggttttgaaataaacaaaaaacttagaTATTTTGACAATGTTGAACAAAATACTTGTTTGGCTATTAACAAGAATTCAAGTAATGAGAATTTAGACAGCTGTAGTACAAATGAAATCAGGGGGAACTCAAAACAAATTGATAATATTGTTCACACAACTACTATCCTAAGTGACGGTTTTGATAATTgcttacaaaataataaaaaacaaaatgaaggCACCCAACCAATATTATCCAATACGCTTTGTGAGTGTCATCAAATTTTGACCGATTCCTCAAAGTTACTTCAAGGAAatgttctttattttaaagttgaatcTTCAGATATTGGTACTCAAACAGAGAGCTCAAGTAGTGTAGGCGATACAAAAAACCAGTTTAATGATATTGATAATATTGAGGCAATTGACTACACTTACTCTCCTAACAATATAGAGTTAAGATCAGTGGGCGAGTTCcttcaaaatatcttaaagATTGGAGGTTCTATACCTCAACTAAGTTATCTTCATAGTATAACTGACATTACTAATATAGATATAGGGAAATTTGATTTGCTTTTTAGCTGCTCCCCACCTGATAACTTAgatgatttagaaaaatacattatatatCTTGGATACCTTTCAGAAGAAATGCCTTATTTTATTGACAGTGCAATGGTGTTAAATGATCTAATAAACATTGTTGCAGATGAAAATACTGTTCCCTCAAGGTCTGCAGTTCATTacagagaaaatgttttgtcaATAAATCATACGAATACAACAGTTACGTCTGAAcctatacaaaaatttaatcgaAGATCTGAGTGGGAATCTTGTGATGacttgttaaaatttgtagaagatgagttaaaaaataataacgatTTAATGAAATCTGATGTCTCTTCAAATTcagttgaaacaaaaacaatagtttCAACAGAAGAAACATCTCATTCTTCCTTAACGCAGTCAactgaaaatctaaaagaatcaaatattttaaatgaatctaatgagaaaaattgtgaccttatacaaaaaaatgaatctgATGACAAAAATCCTGATCtcgaacaaaaaaatgaatttggtGACAAAAAATCTGATCTCAAACAAAAAGATGATGATCTTAACCATAATCCtgacctcaaaaaaaaagaagattttcaagcactttttagaaaattaaaatacgaGTTGGAAAATATGACTTTAAATTCAGATGAAAGCAGTGATTCAGACTCTGATCATGGACCTGTTAAggatttaattagaaattctAATCAGGATAGTTCTTTGCTCAAAGATACCTTTACTGATTTTACTCCACAGAACggaaatacaaataacaaatcTCTATCAGCAATTGAGCTTGAAAATGATGAGTTACGGAAAGAGTTAATGTTAGTTAAGTTAGAAAAAACGCGCCTTGAAGCCTTGTTGTCATCGATGTGCAAAGACTTTGATGCTTCTACGGTTGGTACACCTTCAACTTCAGGAAGCAAGATATCTCGCAAAGGAacaGCATCTCAAGCACGCCAGGAAGGTCTGTCGGACTATCTTCGCTTCTTTCAGAATGATTATTGTTGTTATGACTACATTTTGCTTACAAGtgcgACGAAATCGGGTTTAGTTGCCGACTGGTTATCTCAAGAAAATAGATACTCGAGCATTTATCCAGTATCGCCACTTACCAATTCAGATCTAAGTTTTGAAGATCCAGCATCATTAGAGAATCATCCTTTAGACATGAAAAAGTTAGGTGCGACAGTTCATAAAGAACTTACAGaGGAGCATCTTAACGAAAATGGTGGAGCTACTTCTGTCGAGATGAGAGAAAAATCAGATCGACATTTTCCATTCATTAAAATGAAGAGGAATTCGAGACGCTTTTCCAAAAATCTTAAGAAGTTGGAGGAAGAGCAATAG

Transcript

BRAKERKRET00000014278

Protein

Uniprot

Uniprot term	Description
Q54TL0	Kinesin-related protein 7 OS=Dictyostelium discoideum OX=44689 GN=kif7 PE=2 SV=1
Q91784	Chromosome-associated kinesin KIF4 OS=Xenopus laevis OX=8355 GN=kif4 PE=2 SV=1
Q54UC9	Kinesin-related protein 3 OS=Dictyostelium discoideum OX=44689 GN=kif3 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR027640	Family	Kinesin-like protein	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24115	KINESIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0005871	Cellular Component	kinesin complex	Interproscan
GO:0005874	Cellular Component	microtubule	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20198	KIF17; kinesin family member 17	-	Cytoskeleton proteins	ko04812	deepkoala