Gene detail

Detailed information of BRAKERKREP00000015474.1 in Hydra viridissima

Genomic Location: :...
NR annotation: XP_002161581.1, paired mesoderm homeobox protein 2 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q9PT61	Homeobox protein otx5-B OS=Xenopus laevis OX=8355 GN=otx5-b PE=2 SV=1
Q28EM7	Homeobox protein otx5 OS=Xenopus tropicalis OX=8364 GN=otx5 PE=2 SV=1
O54751	Cone-rod homeobox protein OS=Mus musculus OX=10090 GN=Crx PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356	Domain	Homeobox domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45793	HOMEOBOX PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan