Gene detail

Detailed information of BRAKERKREP00000015552.1 in Hydra viridissima

Genomic Location: not available for this species
NR annotation: XP_047138470.1, 1-phosphatidylinositol 3-phosphate 5-kinase [Hydra vulgaris]
Species Hydra viridissima · all data for this species · gene families

Sequence

CDS

BRAKERKRET00000015552

ATGGATAAGGATCCTACAAAGTTAACATCTTTTCAACCTTTGAACCCTGTTTCTTCTTCCtcctcattttctttttctcgtTTTATTGCATTTGGTCGTCGAAAAACTAGTCAACCACCAAGATTGCCAGCTACTCCAGAACTTTTAAGGAAAGATTCATTTGTTGATGGTGAGTCCAACAGTATTGAAAgttcttcagaaaaaaatgttgatttagaACCTGTACATGAGAAGaaagatAACATGTATAAATGGCTCACTCAAAGTGGTTCTATGCAGAATTCTATTGCTATTGATAATTCTACAGACAGTCCTCGTAAAGATAAATGGAAATACCGAAATGTGCGTACAATTATGCGAAGATTAAGTGCACTTACCATTGATCGAAGATGGCATCAGagTAATGGCGACTTCAAACATAACTTCAAACAGTACTGGATGCCAGATGAACATTGTAAAGAGTGCTATGAGTGTTCTGATAAGTTTAACACTTTTCGAAGGCGGCATCATTGTCGAGTATGTGgccaaattttttgtaatagatGCTGCAGTCAAGAAGTTCCTGGAAAAGTAATGGGATTTTCAGgTGATATTCGTGTTTGTAATTACTGTCACAATATTGTACAAGCCTACCTAAATGATGACTTTGATAAAAGTATAGCAGCTCTTGGTGAAGATTGGAAAATAGGCAGTGATCATTactttttgcataattatggAGGAAGTGCTAACTCATTGAATTCTGTCAAAACTGCTCCTCTTAAGGAAGATCCATTTCGAATGAAGCGTACACCAAGTATTAATAGCTTAGCAAATGCTATTGATCGTGCTACAACACCTATCCAAAGGTCGCCCTTTGATGCTTTTGGAGTTACACCTAGTGAAGCTAATAATATCAAGCAGgattattTATTGCGTGAACTGTGGCGTCAAATTAGTGACCCTAGATCTGGTTTGGAATTACAAAGTCATCGATTTAGAATGAAGACACATCATAATTGCTTTATAGGAAGTGAATTGATTGACTGGTTACAATCTCATGACAAGTGTAATTCAAGattGCAAGCTGTTAAAGTTGTGCAAGCCTTGCTAGATGGTGGTTGGATTGCATGTCTTTATGCTAacgatgaaaatattttcaaagatgaATATATGCTTTACCAGCCTACAAAGaTGGCTTTAGTTGAGACTGAAGTTACTACAATTAATTCCCAGCTTCTTAAAGATGATGTTGATCTAACATGTTTAGGAAAAAATCTTATTGCGGATGATGATGCAGAAGCACCAAAATGGTTCAAGCAAATTTCTCATTCTGTTATTGagGATGAAGTGGAATCAAGCCACCCTGGTCCTGGAGCAAAACCTCTTCCAGctCGTTTGTTAGATTTGGATCAGGTTCCAAATGATACTGACCAAAACAAAGCTGATTTATCAATTCAAATGAAGTTAAATGCACAAAATcttgatgatgataataaagaGCCATTTGATCATGTTtcacaaatttctttaattaccAGTCAACCTCCTGTTCCATTAGACCATTGGACTCTTGTTGAAGTAAATGagttatcaaagaaaaagaagttagCTAAGCAAAACAGTTCTGTTGCTTTGACTGAAGATGTTTTACATGGGGTATTATTTCCACGACCCAGTATAAAGCATGAGGTCCTAGAAGATGATGCAGAATCATCTAAAGATATTAACAATGAGCTGTTAGCTAAAGATCGGTTAACTGCTGCTGCTCAGCATCACCTGAAATCAATGCTAGAACAGCTTTTAAAGCAAGATCATTTGTTACTTGAATGGGATAAAGTTATCATGCCATTTATATTACGAATTAGTGAAAAGgtagcTCCTGATGTTCATCGTGATGATGATATGGATATACGTAGATATGTTTGGTTTACAAAAGTGGAAGGAGGTTTAAAGAGCGATTGTCATTTAATAAGTGGAGTTGTTTTTCCCAAAAACGTTTCTCACAAACGAATGAACACTACATTTTCATCTCCTAAGATACTTATGATGAGTTGTGCTATTGAATATCAGcgagttgaaaataaaatggtttctCTTGATCCAATGGTTTTGCAAGAGCATGCATTTCTACAAAACTTTGTTCGAAGAGTTCTTGATTTAAaaccaaacatttttctaGTGGAAAGAAATGTTGCATGTAAAGCTCAAGAGATGCTTCTTAATGGTGGAATAACTTTGGTTCACAATATAAAACCTCATATTATGGAAAACATATCACGATGCACTGGTGCTGACATCTTACCAACTATGGAGCAAATAACTAAACCAAGACTTGGGACGTGTCAAAGTTTTCGAATAGAAAAGTTTACACTTccaaatGGTGAAACAAAATCTCTTATGTATTTTGAAGGTTGTGCACCTGATCTTGGTTGTTCTTTAGTTCTAAGGGGTGGAAATGTTAAAACActaatgaaagtaaaaaaaattattcagtaTCTTATATATGTGGCATATCACTCCAAACTTGAGCTGAAATTTCTTATGGATGAGTTTGCTATGCCTCCATGTCTAGATCAACTTTTACCTAAATCAAAGCTTGAGTCAGAGATTCaagataaatataatgaagAGAAAACTGATAATATTGAAAGTTTAGAAACTGAAGCAAACAAGTTTCAAAAGAATCtccagaaaattttattatctagTTCACCATTTCTCAGTTACACAATGCCTTATCTTTTAACAGAAGAAGGTGCAAAAAGCAGCTGTAGAGAGTTCATAGCAGAGACAATATACTGGTCACGTTATTTAGATGGTTCTATAAACCGTCCTGGAAAATTTAGAGAAGATGATCATGAATGGGTTGAAAACTCTGTTAAAATTTCTCCAGAAGTTAGATTAAAACCTGCTCATGTTTTTACTGATccttcaattttaattcaatgtATTGAAGATGAGAATAAAAAAGGGAAGTTGCTAAATGATTATCGTGCACAGGGTGGCcgtattgatttaaaaatatatcaagagTTTGAAGATCGTGAacgtaaaaaagtttatggcCCAAATTGGAAGAATCCATTAACTTCAAATAACGATGAAGTGGAAAAAACACACAAGCCAATATCAAATGATGGAAGTGCTAAAGGGTATATGGAAAGTTCACCTGATTCAAAGccCGATTGTTTTGATGCATACAACCATCAGAAAATAGCTGTACTATTTAGCAGTTATTCAAGCGAGTCAAACAACGCTCCTAAACCTTGCATAAGTCCTTGGCCATCTTATATATGCCCATCACACAACTGTGAAATTGCAATGGTTAACCATGTCCGCTATTTTGCACATTGTGATAGCTCATTGTATATACATATGCGAAACTTAGAAACTCCTATACCTGGTTATGATGGAACAATTCTAACCTGGAGTTGGTGTAAAGTATGCAAGCAgGTGACACCTGTAGTTCCATTGTCTTGGGAGTCATCATCTTTATCTTTTGCAAAGTACTTAGAGTTGCGTTTTTATGGTAGCTGTTATACAAGGAGAGGAAGTGTTGAACCATGTTCTCATTCACTTCACCATGACCATTATCAATACTTTAGCTATTCAAACATGGTTGCCTCTTTTAAGTATCGTCCTATAGATTTGTATGAAGTGATTATTCCTGCTTATTCTATCATAATtggtaaacataaaaatacaacACATTTGGTATCTGAAGTTGAAGAGATAAGCAGCAaagtTGAATCTGTCATCAACATGATAATGGAAAGAATCCTTGCTTTAAAAGGTGAAGATTTAGTGCCCAATAACGTAAGAGAGTCTAAGATCAATGAACTTATTAGAGAATTGGAAAAAGAACAAAGCAACACAAGAGATCTTTTGGACGTAATTAACTCCAAAGTTAAAAGCTTGTTAACCAATGATACCAATAATGATGAAGAGGAAGGCAGTTTGGAGATGAGTGGTACTGTTGCACATAATGAATCAGGAGGATTAACTATTGAAGAAGTTCAATCATTAATGATGAATATTAgcaacaaattgttttatttgggGAAAAGTATATGTGATTCTGTTGATAACTGGAATGTTaaATTACAAGACTTTATTGTTCAAGATagaaaaagagagaaaataGTTCGTGCTGCATCACCTTTAAAAACATCAGTTGTCAATGAAACAACAGAGttttatccTGAGAGTTCAATGGATATGGATTTAACAAGACCTAGAACAATAACCCATTTATCATCTAAAGACCCAATTACAGAAGTTTGCCTGAATAATGGTACAATATTGCGCCAGACATACATAGGGAATACACCTGCAGTATATGATTCTTCAGATACTGACTCTACTACATGGACGAGTGCTTTAATTTTACCATCTCCAGCACAAGGAATCAATGAAAGTAGTCCCAATACAGTTAAAGAGCTTAATGATGTTGTTCTGCGTAATAAGTTATGTAGCCCATATACTGTAATTGAGTCTTCTTCAAATGCCCAATCAAATACTAAAAAGGAATTAGACATCGGTGAGACAGATGATAAACTGATTAATACTAGTGAGATCAAGAAGGATTTAACTAATACATCTGTTACAGAGGAAACAAATAATACCTTAAGCACCAACTTTGATAATCAACATTCTTTAAGTTGCATATCCAGTATTTGTGATCAGAGTTTGAATTGTCAATCAGTTAGTAATGATGCTGAACTTTCAGAGAACATCATTTCAAATACAGATGAAGACTCCGAGTCCAATTTTCTGGAGAGTGAAGTTCACCAAGAAACAGACTTCATTGAAGATTCTACAAATGAATCTGCCATTTTACTTGGGGAATCTGCTACTCATTATAACAATGAATCTCTTATTTTACTTGGGGAATCAGCAACACATTATGACACAGACTTAAAGATAGCTCAACGCAGAAAAACTTTGCCTAGTTTTACTGAGTTTCCTAATATTGATAAGGAGAAAATAGACAAGGTTGAATATCTTACTCCCAATGAAGTAAAAGCTATGCAGAATGCACGGCGTAGAAGAGTTGAATGGGAgcaaagagtaaaaaaaaaaggaacttcACCAATAGAAGTTGGTGAAAGCCTAGAGTTTAAATCAAACCATTATAACAAAGATGCAAATATTGAATCAACTAtctctaaatgtttaaatgaaaaaatcctCAAGAAATCTACACCAAATACTaagcatttttcaaatgatataTCCCCttcaacttctaaaaaaataaagacttcttacattaaaaatttattcaagtCTCAATTATCTTCACCAGGAGAATTATCAAATAACAAAGCAAATACTCTTTCCATATCTTCAGATTCCAAACATAATGATCTCACCACCTGTAATGCTAAATCCACTTTATCAAACCCACTGTCTAAAGTTGATAACAGAACTGAGGGATCAACTTTTCATAAGCAAAAGCTGATTGGTCATCGTCGTTTAAAATCTGCTCCAAATtatgttgcaaaaaatttaaacattgaGAGCcttaaagtaataaatgaaCTTCAAGTCAACAATAAAACAGGTGTGTTTAAACAAAGACGTAGTCAATCTTTTGGCATTCAAAATGATGAACAGAAGGAACTAAGTGAAATGGCAGAGGCTGTTTGTAAAGAAGATAGAATGGATTCTGAAAGAGATGATCCTGAAGTATTACAgTATGATGAAGGTATGGTTATTTCTGATCAAGTTTCTCAAAACATCGCATTACAAGAAACGTCTAGTTGTACTGATAACACAGATAgtttaaagaagaagaataaaGCAGATATTGAAAGCATCGattcaaagttttcaaacaGCGGAGAaaGTTTCAATAAACGAGGTGgaagtgaaaaaatgaaaaaaatcatatcaaCTTTCCTTCCAGCATTTACAATTCAAACAATTCCTCGACctttCCCAtcttacatgcattacatTCCTCAGACAGGAGCATTAGCTACTATCATTATTAATGAAAAGGAACCTACTTCTCTGATTGCATATACCCTCAGTTGTCAGGAATATCAAAACCAGTTAAAGAATATACAAGACTTACTGTCAGGAAGAAAAGTTCCTCCTAGTAGTGTACATGGAACTCCAATTTTACCAAGGAATCAAGCTGCTCAACAATCTGTAAACAATCCAAATATGCTTCCTTCATTGAATGATATTCAAAAGGTTGAGGTGTTATTGAGGAggaatgtaaacaaaaagaacCCAAGCCCACGTCCAAATTCTTGGGCTGGTTcatctgaaataaaaacagatgtaACAATCCCAAACGGAGTACAACACCCTCTGACTTTTGCTCCAAGTGATGTAACTACAGATGAAACCTCTGATACTGATATTTTAGATGAAAgtgaaaacataaaatcaggagaagcaaaaaagaaagataagcTTGGTGATCATCACATAAATCatgagtttcaaaatgaaaatgcaaAGTTCTACTGTAGTGTTTATTATGCAGAACAGTTTAGACAACTACGAGAGTTGATATTCCCAGAAAAGGAGGAAAGATATATTCAATCTCTGGCAAGATGCAAATTTTGGAAAGCAACTGGTGGAAAGTCCGGTTCTTCATTTTCCAAATCTTTAgATGATCGCTTTGTAATGAAACAAATGTCTCGTCTTGAAATACAATCGTTTGTCGATTTTGCACCTCGGTATTTTGCTTACATTAACAAAGCTATAAAAGAGAAGCGACCAACAGCTATGGCTAAATTACTCGGTGTATATAGAATCGGATTCAACAATCCTGTTACCAATACGACTATGAAGCAGGATGTACTTGTTATggagaatttattttatgagaaaaaagtaaacaagatttttgatttaaaaggtTCTGTGCGAGGTAGATATGTGCAGACTTCTGCAAAGGAAGACGTCTTGATGGATGAAAATCTGTTAGAAAtGATAAGCGAATCACCTTTGTTCATTCGTCCCCATAGTAAAGCAGTTCTTTCAAAGGCTATTTATAATGACACTGAGTTTCTTTCAATGAATATGGTAATGGATTATTCCTTATTAGTTGGAATTGATCAGACTAATTGTCAGTTAGTCGTAGGTATCATAGATTACATTCGTACTTATACATGGGACAAAAGACTCGAAACCTGGGTTAAATCGACTGGTATTCTTGGTGGACAGGGCAAAATGCCTACTGTCGTTTCGCCTGAAGTTTACCGCACCCGTTTTACCGAAGCTATGCAACGGTATTTCCTTATGGTACCAGATAAGTGGACCGGTTTTGGCGCCGATTTAAATTAA

Transcript

BRAKERKRET00000015552

Protein

BRAKERKREP00000015552.1

MDKDPTKLTSFQPLNPVSSSSSFSFSRFIAFGRRKTSQPPRLPATPELLRKDSFVDGESNSIESSSEKNVDLEPVHEKKDNMYKWLTQSGSMQNSIAIDNSTDSPRKDKWKYRNVRTIMRRLSALTIDRRWHQSNGDFKHNFKQYWMPDEHCKECYECSDKFNTFRRRHHCRVCGQIFCNRCCSQEVPGKVMGFSGDIRVCNYCHNIVQAYLNDDFDKSIAALGEDWKIGSDHYFLHNYGGSANSLNSVKTAPLKEDPFRMKRTPSINSLANAIDRATTPIQRSPFDAFGVTPSEANNIKQDYLLRELWRQISDPRSGLELQSHRFRMKTHHNCFIGSELIDWLQSHDKCNSRLQAVKVVQALLDGGWIACLYANDENIFKDEYMLYQPTKMALVETEVTTINSQLLKDDVDLTCLGKNLIADDDAEAPKWFKQISHSVIEDEVESSHPGPGAKPLPARLLDLDQVPNDTDQNKADLSIQMKLNAQNLDDDNKEPFDHVSQISLITSQPPVPLDHWTLVEVNELSKKKKLAKQNSSVALTEDVLHGVLFPRPSIKHEVLEDDAESSKDINNELLAKDRLTAAAQHHLKSMLEQLLKQDHLLLEWDKVIMPFILRISEKVAPDVHRDDDMDIRRYVWFTKVEGGLKSDCHLISGVVFPKNVSHKRMNTTFSSPKILMMSCAIEYQRVENKMVSLDPMVLQEHAFLQNFVRRVLDLKPNIFLVERNVACKAQEMLLNGGITLVHNIKPHIMENISRCTGADILPTMEQITKPRLGTCQSFRIEKFTLPNGETKSLMYFEGCAPDLGCSLVLRGGNVKTLMKVKKIIQYLIYVAYHSKLELKFLMDEFAMPPCLDQLLPKSKLESEIQDKYNEEKTDNIESLETEANKFQKNLQKILLSSSPFLSYTMPYLLTEEGAKSSCREFIAETIYWSRYLDGSINRPGKFREDDHEWVENSVKISPEVRLKPAHVFTDPSILIQCIEDENKKGKLLNDYRAQGGRIDLKIYQEFEDRERKKVYGPNWKNPLTSNNDEVEKTHKPISNDGSAKGYMESSPDSKPDCFDAYNHQKIAVLFSSYSSESNNAPKPCISPWPSYICPSHNCEIAMVNHVRYFAHCDSSLYIHMRNLETPIPGYDGTILTWSWCKVCKQVTPVVPLSWESSSLSFAKYLELRFYGSCYTRRGSVEPCSHSLHHDHYQYFSYSNMVASFKYRPIDLYEVIIPAYSIIIGKHKNTTHLVSEVEEISSKVESVINMIMERILALKGEDLVPNNVRESKINELIRELEKEQSNTRDLLDVINSKVKSLLTNDTNNDEEEGSLEMSGTVAHNESGGLTIEEVQSLMMNISNKLFYLGKSICDSVDNWNVKLQDFIVQDRKREKIVRAASPLKTSVVNETTEFYPESSMDMDLTRPRTITHLSSKDPITEVCLNNGTILRQTYIGNTPAVYDSSDTDSTTWTSALILPSPAQGINESSPNTVKELNDVVLRNKLCSPYTVIESSSNAQSNTKKELDIGETDDKLINTSEIKKDLTNTSVTEETNNTLSTNFDNQHSLSCISSICDQSLNCQSVSNDAELSENIISNTDEDSESNFLESEVHQETDFIEDSTNESAILLGESATHYNNESLILLGESATHYDTDLKIAQRRKTLPSFTEFPNIDKEKIDKVEYLTPNEVKAMQNARRRRVEWEQRVKKKGTSPIEVGESLEFKSNHYNKDANIESTISKCLNEKILKKSTPNTKHFSNDISPSTSKKIKTSYIKNLFKSQLSSPGELSNNKANTLSISSDSKHNDLTTCNAKSTLSNPLSKVDNRTEGSTFHKQKLIGHRRLKSAPNYVAKNLNIESLKVINELQVNNKTGVFKQRRSQSFGIQNDEQKELSEMAEAVCKEDRMDSERDDPEVLQYDEGMVISDQVSQNIALQETSSCTDNTDSLKKKNKADIESIDSKFSNSGESFNKRGGSEKMKKIISTFLPAFTIQTIPRPFPSYMHYIPQTGALATIIINEKEPTSLIAYTLSCQEYQNQLKNIQDLLSGRKVPPSSVHGTPILPRNQAAQQSVNNPNMLPSLNDIQKVEVLLRRNVNKKNPSPRPNSWAGSSEIKTDVTIPNGVQHPLTFAPSDVTTDETSDTDILDESENIKSGEAKKKDKLGDHHINHEFQNENAKFYCSVYYAEQFRQLRELIFPEKEERYIQSLARCKFWKATGGKSGSSFSKSLDDRFVMKQMSRLEIQSFVDFAPRYFAYINKAIKEKRPTAMAKLLGVYRIGFNNPVTNTTMKQDVLVMENLFYEKKVNKIFDLKGSVRGRYVQTSAKEDVLMDENLLEMISESPLFIRPHSKAVLSKAIYNDTEFLSMNMVMDYSLLVGIDQTNCQLVVGIIDYIRTYTWDKRLETWVKSTGILGGQGKMPTVVSPEVYRTRFTEAMQRYFLMVPDKWTGFGADLN

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Y2I7	1-phosphatidylinositol 3-phosphate 5-kinase OS=Homo sapiens OX=9606 GN=PIKFYVE PE=1 SV=3
Q9Z1T6	1-phosphatidylinositol 3-phosphate 5-kinase OS=Mus musculus OX=10090 GN=Pikfyve PE=1 SV=3
O96838	Putative 1-phosphatidylinositol 3-phosphate 5-kinase OS=Drosophila melanogaster OX=7227 GN=fab1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002213 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01363 all species →	FYVE	FYVE zinc finger	Domain	Interproscan
PF00118 all species →	Cpn60_TCP1	TCP-1/cpn60 chaperonin family	Family	Interproscan
PF01504 all species →	PIP5K	Phosphatidylinositol-4-phosphate 5-Kinase	Family	Interproscan
PF00610 all species →	DEP	Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR027483 all species →	Homologous_superfamily	Phosphatidylinositol-4-phosphate 4/5-kinase, C-terminal domain superfamily	Interproscan
IPR002498 all species →	Domain	Phosphatidylinositol-4-phosphate 4/5-kinase, core	Interproscan
IPR011011 all species →	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR000306 all species →	Domain	FYVE zinc finger	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR017455 all species →	Domain	Zinc finger, FYVE-related	Interproscan
IPR043548 all species →	Family	1-phosphatidylinositol-3phosphate-5-kinase	Interproscan
IPR000591 all species →	Domain	DEP domain	Interproscan
IPR002423 all species →	Family	Chaperonin Cpn60/GroEL/TCP-1 family	Interproscan
IPR027409 all species →	Homologous_superfamily	GroEL-like apical domain superfamily	Interproscan
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR044769 all species →	Domain	1-phosphatidylinositol-3-phosphate 5-kinase, PIPK catalytic domain	Interproscan
IPR027484 all species →	Homologous_superfamily	Phosphatidylinositol-4-phosphate 5-kinase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46715 all species →	1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046488 all species →	Biological Process	phosphatidylinositol metabolic process	Interproscan
GO:0052742 all species →	Molecular Function	phosphatidylinositol kinase activity	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0000285 all species →	Molecular Function	1-phosphatidylinositol-3-phosphate 5-kinase activity	Interproscan
GO:0012506 all species →	Cellular Component	vesicle membrane	Interproscan
GO:0030593 all species →	Biological Process	neutrophil chemotaxis	Interproscan
GO:0031410 all species →	Cellular Component	cytoplasmic vesicle	Interproscan
GO:0032438 all species →	Biological Process	melanosome organization	Interproscan
GO:0052810 all species →	Molecular Function	1-phosphatidylinositol-5-kinase activity	Interproscan
GO:0090385 all species →	Biological Process	phagosome-lysosome fusion	Interproscan
GO:1903426 all species →	Biological Process	regulation of reactive oxygen species biosynthetic process	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00921	PIKFYVE, FAB1; 1-phosphatidylinositol-3-phosphate 5-kinase	EC:2.7.1.150	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of BRAKERKREP00000015552.1 across 29 RNA-seq samples of Hydra viridissima. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

29Samples

7TPM > 0

7Conditions

11.0Max TPM

1.8Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole body	18	1	0.45	8.09
Whole	6	4	6.25	10.99
aposymbioic hydra M9 strain · aposymbioic hydra rep1	1	1	3.96	3.96
aposymbioic hydra M9 strain · aposymbioic hydra rep2	1	1	4.00	4.00
symbioic hydra M9 strain · symbioic hydra rep1	1	0	0.00	0.00
symbioic hydra M9 strain · symbioic hydra rep2	1	0	0.00	0.00
unannotated	1	0	0.00	0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR21134060	whole body	whole body	not recorded	not recorded	SRP392977	8.09
SRR21134050	whole body	whole body	not recorded	not recorded	SRP392977	0.00
SRR21134051	whole body	whole body	not recorded	not recorded	SRP392977	0.00
SRR21134052	whole body	whole body	not recorded	not recorded	SRP392977	0.00
SRR21134053	whole body	whole body	not recorded	not recorded	SRP392977	0.00
SRR21134054	whole body	whole body	not recorded	not recorded	SRP392977	0.00
SRR21134055	whole body	whole body	not recorded	not recorded	SRP392977	0.00
SRR21134056	whole body	whole body	not recorded	not recorded	SRP392977	0.00
SRR21134057	whole body	whole body	not recorded	not recorded	SRP392977	0.00
SRR21134058	whole body	whole body	not recorded	not recorded	SRP392977	0.00
SRR21134059	whole body	whole body	not recorded	not recorded	SRP392977	0.00
SRR21134061	whole body	whole body	not recorded	not recorded	SRP392977	0.00
SRR21134062	whole body	whole body	not recorded	not recorded	SRP392977	0.00
SRR21134063	whole body	whole body	not recorded	not recorded	SRP392977	0.00
SRR21134064	whole body	whole body	not recorded	not recorded	SRP392977	0.00
SRR21134065	whole body	whole body	not recorded	not recorded	SRP392977	0.00
SRR21134066	whole body	whole body	not recorded	not recorded	SRP392977	0.00
SRR21134067	whole body	whole body	not recorded	not recorded	SRP392977	0.00
SRR10058803	Whole	Whole	not recorded	not recorded	SRP220397	10.99
SRR10058807	Whole	Whole	not recorded	not recorded	SRP220397	10.13
SRR10058806	Whole	Whole	not recorded	not recorded	SRP220397	8.70
SRR10058805	Whole	Whole	not recorded	not recorded	SRP220397	7.67
SRR10058802	Whole	Whole	not recorded	not recorded	SRP220397	0.00
SRR10058804	Whole	Whole	not recorded	not recorded	SRP220397	0.00
DRR048593	aposymbioic hydra M9 strain · aposymbioic hydra rep1	not recorded	not recorded	aposymbioic hydra rep1	DRP003902	3.96
DRR048594	aposymbioic hydra M9 strain · aposymbioic hydra rep2	not recorded	not recorded	aposymbioic hydra rep2	DRP003902	4.00
DRR048595	symbioic hydra M9 strain · symbioic hydra rep1	not recorded	not recorded	symbioic hydra rep1	DRP003902	0.00
DRR048596	symbioic hydra M9 strain · symbioic hydra rep2	not recorded	not recorded	symbioic hydra rep2	DRP003902	0.00
ERR13389755	unannotated	not recorded	not recorded	not recorded	ERP162636	0.00

Source: CnidoSite RNA-seq expression matrices (HVIRI_TPM, StringTie quantification over 29 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.