Gene detail

Detailed information of BRAKERKREP00000015733.1 in Hydra viridissima

Genomic Location: :...
NR annotation: XP_047146715.1, trichohyalin [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERKRET00000015733

ATGGTACTGCAAGATCTTGGGTATCTCTTTGATTCACTTGATATTGAATGTAAAGGTTACTTGGAATGGATTGAGTTGCAACAGATTGATGAAGAGATTTACCATGAGGCACTTGATATTAAGCAGTTAGAAGCTGCTATTAGCACAGTTTGTGGCAGTAAAGCTAATGGAAAATGCACTAAAGAATATTTCCCAGATGTGCTTAAAGAAATTGATAGACGTCATGTTATGGAAGAGCAAATTCGATGGGATTTTTGTGCTCTTGATGTTGATAAAGTTGGACGAATATCAATTCAGTCagctttatttctttttaaagctgTACTTGGTGAGAGATTTTCAAAGCGCTtttggaaaagatttttagataGTCGAATTGATTCTAGTAAAGATATTTgctttgatgaaataaaaataagccTCTGCAGCATACCAGACTTTGCTGCAGCTGATAGTGAAAGAGATTATGAAGAACAAAATAGAGTGGTTAGTGATCAGGTGCAGCAGAACatatacaaaatgtttaaagaactTGAAGATTCtcagAATGATGATACAGTAATGGCTGCAAAAGCAAGAGCAAAACAAGTACAATctcttcagataaaaaatagaGCTTATCACTTGCTGAACAGAATGGATGAGGTTGGAATGCAAGCATTACTGGAAGATGACTATGATGATGGAAATAGTTTTGAAGGAAGGCCTAAAGATCGTGTTGCAGCAGCTGATGTATTTGATGcattaaatgaaaaATACCAGGTTCTTCGTGACAAACTTCTTCTAGAAATGTTACAGGAGCATTTTGGTATGGGCATGTGGCAATCTTTATCTGAATTTGAGCAGCAAGAAAAGCTTTTTCAGCTAAAGATTAAAGAAGAGAAACTTCGCAAAGAATCTCAATTAGAAACAATGGCTAAGCATTTACCTGGTTCAGGAGTAGTAACTAGCTATAACTTGTTCACTCTTATGTGTGAAAGTTTTCCTGAAATGGAAAACCGAGTAAAAGAGCAGGAAGAAAAAACCCTCAAAAGTGCACTTACTTATGAAGAGatagaaaatgaatttaacaaTCAACTAGCCTCTAAGGAAAAAGAGAAATCAACAAGCGAATTAACTTTGATTGCAATTAATCAACGATATAACTTGGAAAAAGACTACATTGTAAAAAGACTTCAAGGTCTTTCTGGTTATGCAGCCATGGATGCAAAAGAGcgtgaaaatttttattttagctatGTGCTTGCAAGGCTAAGGGGTATTCAAGAAAGCAGTTTTTACTCTTGTGCTACTTCTGTAGGGCTGTCTGAAAGGattgaacaaaagaaaaacaatcgtatATCAAATGATACAGAAAAACAGAATCTATTAGGTCTTTGCAGAGTTAAAGTATTTCGCCAGCGTCATATTCCTGATGAGTTGATTATTCCACCAAAAATATTCCCTCTAAAATCAAAGCTTGGTCGCATTGATCTTGCTATGCAACTACTGCAAGAGGCTGAGCGCATGTTTGCACTAGAAAGAGAAGCATTATTAGATTTCATGTTTTCAAGAGAATACTTGCATTTTAGATTAGCAGCCAGGAAACTTAACGGagAGGAAAAGTATAGCCAGCTAAATCTGTTACGCACTCGTTGGGAAAGCAATTCGTCAAAAAGTCAATCTgagaaactttcttttaacaaaaaatgtttacaagaAGCTGTTGCTTTGAAGTTTGAATCTACCCTTGATGAAATGACAAATAGTAATGATATTGATGTAGCTTCTCACTTACTTGCTTGTTTACAGTTGCGTCAAGATGAAGAATGCCGAAAGTTTATTAGTGTTGGTCATTTAGGAGTTGAAAGTTTGACTTCATACTGGAAAACTTACACACAAGCTATCAcagaagaaaactttaaatgtattGCTGGTATTGTGTTTAGTATTTCAGAGATTTCTGAGGATGAAAAAGAGATAATTGGAGCTCTGGAAAAGAAGTATGATGTTTTAAGAGATAAGCTTATGTTAGAAGCTCTTATGAATCAGTTTGGAAAAGCAGAATGGGATAAGCTTTCTGAGCAAGAAAGGCAAAATGAGCTTTTTAAGCTCAAGTTAAtggaaagaaaattaaaaagagaagGCAAATATGATGAGCTATCTAAACTGTTAGATGATTCATCACATCACTCAGAAACACTTAATAAACTACTGGGACAAAATCGACAGCAGTATCTAGACAAACTTAATGAGCGTTTAAAAAATCGTCAGCATCGGATTGCATTAGGAGAAGATCCAGACAATATTTCTGAAGATGAAGTTGAGTCTCAACAAGATGCCATAACAggcaatattttgaaagatcttgataaaagatttgatgatgaaaagaatgcccttttaaaaagattaaggGATGAGCATGATATGAATGAAAAAGAACGCGAGCGCCATGCTCAACTTTTAAGATTAAGACTGGAAGCACGAAAAGCAgccaaagaaaataatttagatgGTGCAGCATTAGTACTTGGGTTGGCTGAGCGCAATAAAGCAAATCTTTCTGACagACTAAAAAATGACCGACAGCGTCAAGAGCAGTTAGCTAGAGAAAGATTGGCtgcaagaaagaaaaaaatgtctttctCAAAAGATATTGTTGATTCTCAGCCTAATAATGATGATATAGCTGGTTGGCAGGATTTCGTATTAAAAGAGCTAGAGCGAAAGCATGAGAAAGAACGAAACTTGTTCTTTGATCTTCTACAAGATGAAGAGACAAAAAATCTTCGCAATGATGCTCGTCTTATGAATGAAGATACACGCTGTAAACAGCTTAACAAGTTAAGAGCTAAAAGGGAAGAGCTAGACTTAGAAGATAAATCTGATCAGGAGGAACATTTGTCTATATTAGAAATGGCAGCAGCAATAAAGTATGTCATCACAGAATCATTTCTTAAGGAAAACTctgatgatattttttcagctgAAAGTGTGGTTGTATCAGTAATGGCTGATCTACAACAAGTTCAAGATATTGAAACTGAAACCGTACTTAGTTCTCTTccaaataaaaCTCTTTATGAGTTGCTAATTCTACGCAACAAGTATATTGAggaacaaaatcaaaatgcagCTTCAAATGTGGTCAAAGTGGTATTTACATTTCATGGCCCAGCAAAAGATGAGGAGCTTCTAAAAGCGGTTGACAAAAagtataacattttaatggaTAAACTGGCCTTAGAAGCTCTACAGAAACAAATggGCAATGCTGAGTGGTTACAACTGTCTGAAAAGGAACGCCAAGTCAAATTAATGCGCTTAAGACTTGAACAAAAACAACTGCTAAAAGATGGTAAATTAGATGAAGCAGCTCGCTTACTTGGTGATGGTTTTAAAGTTgatgcaaatataaaaattttaatggaggaaaacaaaaagaaacaaaatgagattttacaaaaacgaCTTGAACAGTATAGGCAAAAACTTGCCAAAGGGGAGGACCCTGGAGACTTACCAACATGTATACCAGAAAATGATAATTCAGAAACATTGTGTGTTGTTGATGGAAAAGTGTTGCTGGAAGACTTACAGAAAAGGCATGAAAGTGAAAAAGAGGCTCTTTTAAATCGATTGCGTGGTGTTGACTCTCAATACTTAAGTGAAAAGGAAAGACAAGCAGAACTGGCAAAACTGAAACGAGAACAAAGAAGAGTCCAGCAAGAAGAAAAGTTTGGAGCTGCATCATTGGTTATAGGAATTGCAGAACAAAATCAGGCAGCTGTTCAagaaaaatttaaaaatgatcgTCAACGCCAGGAACAACTTGCTAAAGAAAGATTGGAGCAATTGAGAAAGAAGAAACATtctcaagttgaaaaaatagcTGTAGCTGATGATGTTAAGGATCCTCACGAAGCATTATTTGTTGCTATTGAAAGAAGACATGTTCTTGAAAGAGAGGATCTTGTAAAGTACTTGCAAAATATCTCTATGGAAAAAGTTGATAATATCcaacttttatcattaatgAATCAAAGAATGCTTTTAGAAAATTGGAAAGCTTTTTCTTTGGAAGTGGgtaATTTTAATGCTGCAGTGAACGAATTGgctgttttaaagtttgttgatAGAATGAGAACTTTAAAGCtaactcaaaattttgcagataatattttagttaGTATACTAGCAGATTTGCAGCAACGTCAAGATCAAGAGAGTGATGCCATTATGAAATCTGCTTTAGAAATGGATGTGAATAAACTGAATGAGttgttagaaaaagaaaaagtcatGTGTCATTATCATACTTTTCctaatatttcatatataatgGCAATGATGGATGAACAAAGTACTAATGATAATTCCGTTTTCATAAAAGGCTTAGAAGAAAGGTTTATAGCTTTGGAAGACAAACTTATTATCAGCGgtcttgaaaaaaagtttggtaaAACAGTCTGGAAAAGCTTGAGCACTCTAGACCATCATAATGAATTGCTTAAAGTTAAGCAAGAACAAAAGAGATTAAATGAAATGGGTAAAAGTGAAGAagcaattaaacttttaagtagTTTAATTGTCCTTGAAAATAAGCATCATCTTTTACTTTGTCTAACTAAAGCTCAAGAAGAAGAACGATTGAAGAAAAAAGCAGCTCTTTGGCAGAAGATGAGTGAAGAAgggaaaacaaaaattaaggAAGAGGATAGAGAAActgaagaaattgaaaaagctCTCCAGGAAAAATCAACTGGAAACACCCTAAAGGACCTTaaaGAAATCTTTGAAGCAGAAAAGAGGGAGTTACTGCTAATGCTGGAAAGCAATGATACCAAAGTAAACAATGAACATAGCAGACAGTTGAAATTAGCACGTTTATGGCACAATGCCAGACAAACCTTTTCAGAAAGTAATTATAACACAGCTGTGTTGAGACTTCTTACATCAAAGTCTCAggaaatatcttttaattcaagaatatctaATGACCGGCAACAGCAGGAACTACTTGCAAAAGAACGGTTggagttttataaaaacacacaAGTATCAGAACAAGAACAAGTGCATCAAGagtttattgattttgttgCTGCAGATGCTAATAGTGTCATTGCTCTACAGGATGCTTTATTAAATGAACTTGAGAAGAAGCATATTTCAGAAAGAAATTACTTAATTAATCTTATCTACCCAGTAAAAgcaagtattttcaaaaagaagaaattgttGCCTCAACATTGCAGTGCACGCCTTGTGGAACTTAaggAACTATATCAAcaatgccaaaaaaataacaacctATTTGATAGTCCACTagtaatttttgaagaagCATACcacttgaaattaaaagaaagtgaATATGATGGTTCTGATATAAAGTTTTTGGCAGATCTGCAAGATGTTCAGGATACAGAAGTGGAACAAATTCTTAGTGAGCTAGTAGATAAGAGCGTAATTGTGTTAAAACAGTTTGTTCAAGTCCAGCAATCTGCTCGTCAAAGAAAATTGTACAACAATATTGCTGAAATATTGTTCGGAGAAAGAGGCAATCAAGCAGATGAGTTAGTACAAGCTTTAAAAGAGAAGTATGATGCCATTAAAATGAAGTTGTATGAGGAAGCACTTAGAACaaaatttggtGAGGAAGCATGGGATAATATGACAGAACAagagaaaagtaaatatttagcCAAAATGAAAGCTGAAGAGCTTTTAATTGGAGGCCAAAGagaGCTGGACTTGTTAAATATTCCAGAAATAGAAATGCCAATGGCTAAAGAGATTTCagataaaaagttgaaagaacAAGCAGagagaattaaaaagttaaaagaagaagGGAAAACAGATGAAGaaatcaatgttttatttgaaaatgaagcTGATATTGAAGGGAAGAAAGCGGTGAAAGGGaaagatataataaaagatcttcaaAACCAATTTGAAAGTGAAAAGGAGGCACTTCTTGAAATGATCAGACAAAGAGATGTTACTGACAAGAATGAGAGAGGCAGGCAGTTAGAGCTTTGTCGTTTAcgtcaagaaaaaaagagaattcaGAGAGAAGATAAGTTTAATGGAGCAGCACTTCTATTTACAATGgcttctaaaaatgaaaagaacaGTGAGCtaagcatGGAGAATGAACGAGCTCGCCAGCAACAACTTGCACAACAGCGTATACTTGCATGTCGtgagagaaaaagaaaagatctTCTGAGTAGTgatgaaattttagaaaaagaagaaaatgaagatgCTAAAGATGATTTAGTATCAATTGAGCAGATACAGAGAGAAGGAACTATTGCTCTTCAAGAGTCGCTGCTGCTTGAGATTGAGAAAAAGCATTCCGCTGAAAGAGATgccttggttgaaatatttgaagaaatgGAAGTTCTTGATAAAAGGGCCACGTTTTCTGATCAtgaaaaaatccttaaaatacaagatatttcaaaaaaaagggACAAGTGCATTGaacagttttgtttgtttctgtCTACTCAGCCATCAGATAATGCAATGAGTGAGACCGAAAAATCTTTATACAATGAATCGCTGCTTCAGCACCAGCGTTCATCTTtagctattttaaaagaaggCATAGCATTCAAAGTTGCTTTAGAAAACACGATCAGAGAAGAtccttgtgttttttttatgacaaaattgCAAGAGCAACAAACATTAGAGATAAACTCGACAATGAAAATCATGGTGCAAATTAATCGTGAGACcctcaaaaatttaaaagatgaacATCGCAAAGCAAGGCGTGGAGGATGGATGGACAATATTGCCAATCtgattttcataaacaatgaagtgCCGCTAAATGAACTTCAAAAGGAACTCGaagctgaagaaaaaaaagttttggagTCGACCAACGCTCAAATTAAAGAGTTAGAAAaggaaatagaaaaagaaaaagaaacagtaTTATCTTCGTTGACAAAAGATGAAGTTGAGGGCTTcatgaaagaattaaaagaaagagaGCATTCTAAGCGTATGGTCATTGAGGAACAAGCGAAACGCCAACGTGATGCTGCTCAACAGCGGTTAGAGGAAAAACGTCGCAAGCGTGATGTAAAGACTTTTGAAAATGATCTTGCCCACGCAATGCTagaaaatgccaaaaaaagaGGGATTTTGCTGAAAGAGAAAATTTCAGCAGTGCAAGGTGCGCAAAAAGACGAGCTTGAAGAGCGTTTAAGAATGAGAAGAGAAGAACGAAAACGAAAGCAGGATCTAGAAGAACAAAAAGCCACTGCGATACAAAAGGAGGCTCAAGAAAAAAGTTCCGCGCTTGATGACGATAACAAGAGGAAAAACGAAAGCGAAACAATTCAAGATTCAGTAGTTCCGAAAAATCTGCAAGAAAATCAGattggAGCAGAAAAAAGAGTTGGTGATTTGGTCAAGGAGAAACAACCAGAAGTCAAGATAAAGAAAGTAATGCCGCCCTTACCCGGAGGTGGTATGAAGCGAGAAAAAACAGTTGTTGAACAAGCAGGAGAAATAtctgataataaaaagaaacagatGATTAATGTGCTCATGAGAGAGCAAACAtcaattgctaaaaaaattaacaaggaACAAGAAAGGCAAGAAGAGCTGgtaCGAGAACTACGCGAAAAAAGACGCAAAAAAATGGAGGCTCGTGAAATGGAAGCAGCTGCAGTAATAGGCTTAGGTGCCAGACAAAAAACAATGGTGGAGGACCATAAGAAGGGTGAGCGCGAACGCCAAATCGAGCAAATACGTGAGCGTGTAAATCGTATTAAAAGTGCAAGGGGCGGTAGAAAAGGATTTGATCAAAATGCCGAGTTTGAAGAGCTCGATAACTCAGATCGTGTGAAAGTAAGACcttaa

Transcript

BRAKERKRET00000015733

Protein

BRAKERKREP00000015733.1

MVLQDLGYLFDSLDIECKGYLEWIELQQIDEEIYHEALDIKQLEAAISTVCGSKANGKCTKEYFPDVLKEIDRRHVMEEQIRWDFCALDVDKVGRISIQSALFLFKAVLGERFSKRFWKRFLDSRIDSSKDICFDEIKISLCSIPDFAAADSERDYEEQNRVVSDQVQQNIYKMFKELEDSQNDDTVMAAKARAKQVQSLQIKNRAYHLLNRMDEVGMQALLEDDYDDGNSFEGRPKDRVAAADVFDALNEKYQVLRDKLLLEMLQEHFGMGMWQSLSEFEQQEKLFQLKIKEEKLRKESQLETMAKHLPGSGVVTSYNLFTLMCESFPEMENRVKEQEEKTLKSALTYEEIENEFNNQLASKEKEKSTSELTLIAINQRYNLEKDYIVKRLQGLSGYAAMDAKERENFYFSYVLARLRGIQESSFYSCATSVGLSERIEQKKNNRISNDTEKQNLLGLCRVKVFRQRHIPDELIIPPKIFPLKSKLGRIDLAMQLLQEAERMFALEREALLDFMFSREYLHFRLAARKLNGEEKYSQLNLLRTRWESNSSKSQSEKLSFNKKCLQEAVALKFESTLDEMTNSNDIDVASHLLACLQLRQDEECRKFISVGHLGVESLTSYWKTYTQAITEENFKCIAGIVFSISEISEDEKEIIGALEKKYDVLRDKLMLEALMNQFGKAEWDKLSEQERQNELFKLKLMERKLKREGKYDELSKLLDDSSHHSETLNKLLGQNRQQYLDKLNERLKNRQHRIALGEDPDNISEDEVESQQDAITGNILKDLDKRFDDEKNALLKRLRDEHDMNEKERERHAQLLRLRLEARKAAKENNLDGAALVLGLAERNKANLSDRLKNDRQRQEQLARERLAARKKKMSFSKDIVDSQPNNDDIAGWQDFVLKELERKHEKERNLFFDLLQDEETKNLRNDARLMNEDTRCKQLNKLRAKREELDLEDKSDQEEHLSILEMAAAIKYVITESFLKENSDDIFSAESVVVSVMADLQQVQDIETETVLSSLPNKTLYELLILRNKYIEEQNQNAASNVVKVVFTFHGPAKDEELLKAVDKKYNILMDKLALEALQKQMGNAEWLQLSEKERQVKLMRLRLEQKQLLKDGKLDEAARLLGDGFKVDANIKILMEENKKKQNEILQKRLEQYRQKLAKGEDPGDLPTCIPENDNSETLCVVDGKVLLEDLQKRHESEKEALLNRLRGVDSQYLSEKERQAELAKLKREQRRVQQEEKFGAASLVIGIAEQNQAAVQEKFKNDRQRQEQLAKERLEQLRKKKHSQVEKIAVADDVKDPHEALFVAIERRHVLEREDLVKYLQNISMEKVDNIQLLSLMNQRMLLENWKAFSLEVGNFNAAVNELAVLKFVDRMRTLKLTQNFADNILVSILADLQQRQDQESDAIMKSALEMDVNKLNELLEKEKVMCHYHTFPNISYIMAMMDEQSTNDNSVFIKGLEERFIALEDKLIISGLEKKFGKTVWKSLSTLDHHNELLKVKQEQKRLNEMGKSEEAIKLLSSLIVLENKHHLLLCLTKAQEEERLKKKAALWQKMSEEGKTKIKEEDRETEEIEKALQEKSTGNTLKDLKEIFEAEKRELLLMLESNDTKVNNEHSRQLKLARLWHNARQTFSESNYNTAVLRLLTSKSQEISFNSRISNDRQQQELLAKERLEFYKNTQVSEQEQVHQEFIDFVAADANSVIALQDALLNELEKKHISERNYLINLIYPVKASIFKKKKLLPQHCSARLVELKELYQQCQKNNNLFDSPLVIFEEAYHLKLKESEYDGSDIKFLADLQDVQDTEVEQILSELVDKSVIVLKQFVQVQQSARQRKLYNNIAEILFGERGNQADELVQALKEKYDAIKMKLYEEALRTKFGEEAWDNMTEQEKSKYLAKMKAEELLIGGQRELDLLNIPEIEMPMAKEISDKKLKEQAERIKKLKEEGKTDEEINVLFENEADIEGKKAVKGKDIIKDLQNQFESEKEALLEMIRQRDVTDKNERGRQLELCRLRQEKKRIQREDKFNGAALLFTMASKNEKNSELSMENERARQQQLAQQRILACRERKRKDLLSSDEILEKEENEDAKDDLVSIEQIQREGTIALQESLLLEIEKKHSAERDALVEIFEEMEVLDKRATFSDHEKILKIQDISKKRDKCIEQFCLFLSTQPSDNAMSETEKSLYNESLLQHQRSSLAILKEGIAFKVALENTIREDPCVFFMTKLQEQQTLEINSTMKIMVQINRETLKNLKDEHRKARRGGWMDNIANLIFINNEVPLNELQKELEAEEKKVLESTNAQIKELEKEIEKEKETVLSSLTKDEVEGFMKELKEREHSKRMVIEEQAKRQRDAAQQRLEEKRRKRDVKTFENDLAHAMLENAKKRGILLKEKISAVQGAQKDELEERLRMRREERKRKQDLEEQKATAIQKEAQEKSSALDDDNKRKNESETIQDSVVPKNLQENQIGAEKRVGDLVKEKQPEVKIKKVMPPLPGGGMKREKTVVEQAGEISDNKKKQMINVLMREQTSIAKKINKEQERQEELVRELREKRRKKMEAREMEAAAVIGLGARQKTMVEDHKKGERERQIEQIRERVNRIKSARGGRKGFDQNAEFEELDNSDRVKVRP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06115	SPTBN1_4_5; spectrin beta, non-erythrocytic 1/4/5	-	Cytoskeleton proteins	ko04812	deepkoala