Detailed information of BRAKERKREP00000016054.1 in Hydra viridissima

Genomic Location: :...
NR annotation: XP_047132082.1, endoribonuclease Dicer isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q25BN1Endoribonuclease Dicer OS=Gallus gallus OX=9031 GN=DICER1 PE=2 SV=3
Q8R418Endoribonuclease Dicer OS=Mus musculus OX=10090 GN=Dicer1 PE=1 SV=3
Q9UPY3Endoribonuclease Dicer OS=Homo sapiens OX=9606 GN=DICER1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF20930Dicer_PBDDicer, partner-binding domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF03368Dicer_dimerDicer dimerisation domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR038248Homologous_superfamilyDicer dimerisation domain superfamilyInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR048513DomainDicer, partner-binding domainInterproscan
IPR051363FamilyRIG-I-like Receptor (RLR) HelicaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR005034DomainDicer dimerisation domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14074HELICASE WITH DEATH DOMAIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016891Molecular FunctionRNA endonuclease activity, producing 5'-phosphomonoestersInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15271HFM1, MER3; ATP-dependent DNA helicase HFM1/MER3EC:5.6.2.4
Chromosome and associated proteinsko03036deepkoala

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