Detailed information of BRAKERKREP00000016349.1 in Hydra viridissima

Genomic Location: :...
NR annotation: XP_047135256.1, uncharacterized protein LOC101239718 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9UPM6LIM/homeobox protein Lhx6 OS=Homo sapiens OX=9606 GN=LHX6 PE=1 SV=2
Q9R1R0LIM/homeobox protein Lhx6 OS=Mus musculus OX=10090 GN=Lhx6 PE=1 SV=2
P36198LIM/homeobox protein Lhx2 OS=Rattus norvegicus OX=10116 GN=Lhx2 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan
PF00412LIMLIM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR001781DomainZinc finger, LIM-typeInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR050453FamilyLIM/homeobox transcription factorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24208LIM/HOMEOBOX PROTEIN LHXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030182Biological Processneuron differentiationInterproscan

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