Genomic Location: not available for this species
NR annotation: XP_047143399.1, meiosis regulator and mRNA stability factor 1 isoform X1 [Hydra vulgaris]
Species abbreviation HVIRI · all data for this species · gene families
| CDS |
| BRAKERKRET00000017243 |
| Transcript |
| BRAKERKRET00000017243 |
| Protein |
| BRAKERKREP00000017243.1 |
| UniProt accession | Description |
|---|---|
| Q8BJ34 | Meiosis regulator and mRNA stability factor 1 OS=Mus musculus OX=10090 GN=Marf1 PE=1 SV=3 |
| E1BP74 | Meiosis regulator and mRNA stability factor 1 OS=Bos taurus OX=9913 GN=MARF1 PE=3 SV=2 |
| B2GUN4 | Meiosis regulator and mRNA stability factor 1 OS=Xenopus tropicalis OX=8364 GN=marf1 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004453 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00076 all species → | RRM_1 | RNA recognition motif | Domain | Interproscan |
| PF01936 all species → | NYN | NYN domain | Domain | Interproscan |
| PF13893 all species → | RRM_5 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | Domain | Interproscan |
| PF11608 all species → | MARF1_RRM1 | MARF1, RNA recognition motif 1 | Domain | Interproscan |
| PF12872 all species → | OST-HTH | OST-HTH/LOTUS domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000504 all species → | Domain | RNA recognition motif domain | Interproscan |
| IPR025605 all species → | Domain | OST-HTH/LOTUS domain | Interproscan |
| IPR000571 all species → | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR035979 all species → | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR021139 all species → | Domain | NYN domain | Interproscan |
| IPR012677 all species → | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR041966 all species → | Homologous_superfamily | LOTUS-like domain | Interproscan |
| IPR034189 all species → | Domain | MARF1, RNA recognition motif 1 | Interproscan |
| IPR024768 all species → | Family | Meiosis regulator and mRNA stability factor 1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14379 all species → | LIMKAIN B LKAP | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0046872 all species → | Molecular Function | metal ion binding | Interproscan |
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0004540 all species → | Molecular Function | RNA nuclease activity | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0005777 all species → | Cellular Component | peroxisome | Interproscan |
| GO:0010468 all species → | Biological Process | regulation of gene expression | Interproscan |
| GO:1905762 all species → | Molecular Function | CCR4-NOT complex binding | Interproscan |
BRAKERKREP00000017243.1.
