Genomic Location: QPEY01000197.1:116729...118090
NR annotation: XP_047138567.1, uncharacterized protein C1orf50 homolog [Hydra vulgaris]
Species Hydra viridissima · all data for this species · gene families
| UniProt accession | Description |
|---|
| Q5PQ76 | Uncharacterized protein C1orf50 homolog OS=Xenopus laevis OX=8355 PE=2 SV=1 |
| Q502G5 | Uncharacterized protein C1orf50 homolog OS=Danio rerio OX=7955 GN=zgc:112255 PE=2 SV=1 |
| Q5EBG8 | Uncharacterized protein C1orf50 homolog OS=Mus musculus OX=10090 PE=1 SV=1 |
No Gene Ontology signature was recorded for BRAKERKREP00000020264.1 in Hydra viridissima.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the
Functional Domain Search page, which searches all 148 annotated genomes at once.
No KEGG orthology assignment for BRAKERKREP00000020264.1.
Searching by KO or pathway ID across
all species is available on the
KEGG Pathway page.
Expression pattern (RNA-seq)
Transcript abundance of BRAKERKREP00000020264.1 across
29 RNA-seq samples of Hydra viridissima.
This gene has no row in the species' RNA-seq expression matrix, so every value below
is shown as zero — the matrix simply does not cover this transcript.
Values are TPM (transcripts per million) from the StringTie quantification; one bar is one
sample, grouped and coloured by condition, sorted by expression within each group.
29Samples
0TPM > 0
7Conditions
0.0Max TPM
0.0Mean TPM
By condition
| Condition | Samples | TPM > 0 |
Mean TPM | Max TPM | Mean, relative to max |
| whole body |
18 |
0 |
0.00 |
0.00 |
|
| Whole |
6 |
0 |
0.00 |
0.00 |
|
| aposymbioic hydra M9 strain · aposymbioic hydra rep1 |
1 |
0 |
0.00 |
0.00 |
|
| aposymbioic hydra M9 strain · aposymbioic hydra rep2 |
1 |
0 |
0.00 |
0.00 |
|
| symbioic hydra M9 strain · symbioic hydra rep1 |
1 |
0 |
0.00 |
0.00 |
|
| symbioic hydra M9 strain · symbioic hydra rep2 |
1 |
0 |
0.00 |
0.00 |
|
| unannotated |
1 |
0 |
0.00 |
0.00 |
|
Source: CnidoSite RNA-seq expression matrices (HVIRI_TPM,
StringTie quantification over 29 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
