Gene detail

Detailed information of BRAKERKREP00000022484.1 in Hydra viridissima

Genomic Location: not available for this species
NR annotation: WP_129148845.1, GGDEF domain-containing protein [Achromobacter aloeverae]
Species Hydra viridissima · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P0AAP2	Probable diguanylate cyclase DgcC OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=dgcC PE=3 SV=1
P0AAP1	Probable diguanylate cyclase DgcC OS=Escherichia coli (strain K12) OX=83333 GN=dgcC PE=1 SV=1
P54595	Uncharacterized protein YhcK OS=Bacillus subtilis (strain 168) OX=224308 GN=yhcK PE=4 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004383 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00990 all species →	GGDEF	Diguanylate cyclase, GGDEF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029787 all species →	Homologous_superfamily	Nucleotide cyclase	Interproscan
IPR043128 all species →	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR050469 all species →	Family	Bacterial Diguanylate Cyclase	Interproscan
IPR000160 all species →	Domain	GGDEF domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45138 all species →	REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0043709 all species →	Biological Process	cell adhesion involved in single-species biofilm formation	Interproscan
GO:0052621 all species →	Molecular Function	diguanylate cyclase activity	Interproscan
GO:1902201 all species →	Biological Process	negative regulation of bacterial-type flagellum-dependent cell motility	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKREP00000022484.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.