Gene detail

Detailed information of BRAKERKREP00000022538.1 in Hydra viridissima

Genomic Location: not available for this species
NR annotation: WP_056567414.1, MULTISPECIES: 30S ribosomal protein S18 [Achromobacter]
Species Hydra viridissima · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2KZ21	Small ribosomal subunit protein bS18 OS=Bordetella avium (strain 197N) OX=360910 GN=rpsR PE=3 SV=1
A9IT96	Small ribosomal subunit protein bS18 OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) OX=340100 GN=rpsR PE=3 SV=1
Q7WL33	Small ribosomal subunit protein bS18 OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) OX=257310 GN=rpsR PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0051335 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01084 all species →	Ribosomal_S18	Ribosomal protein S18	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036870 all species →	Homologous_superfamily	Small ribosomal subunit protein bS18 superfamily	Interproscan
IPR001648 all species →	Family	Small ribosomal subunit protein bS18	Interproscan
IPR018275 all species →	Conserved_site	Small ribosomal subunit protein bS18, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13479 all species →	30S RIBOSOMAL PROTEIN S18	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0070181 all species →	Molecular Function	small ribosomal subunit rRNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02963	RP-S18, MRPS18, rpsR; small subunit ribosomal protein S18	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.