Gene detail

Detailed information of BRAKERKREP00000022617.1 in Hydra viridissima

Genomic Location: not available for this species
NR annotation: WP_094803143.1, methionine ABC transporter permease [Bordetella genomosp. 5]
Species Hydra viridissima · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9KTJ6	Probable D-methionine transport system permease protein MetI OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=metI PE=3 SV=1
Q9CK96	Probable D-methionine transport system permease protein MetI OS=Pasteurella multocida (strain Pm70) OX=272843 GN=metI PE=3 SV=2
P46492	Probable D-methionine transport system permease protein MetI OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=metI PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0064071 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00528 all species →	BPD_transp_1	Binding-protein-dependent transport system inner membrane component	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035906 all species →	Homologous_superfamily	MetI-like superfamily	Interproscan
IPR000515 all species →	Domain	ABC transporter type 1, transmembrane domain MetI-like	Interproscan
IPR051322 all species →	Family	Amino Acid ABC Transporter Permease	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR30450 all species →	ABC TRANSPORTER PERMEASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006865 all species →	Biological Process	amino acid transport	Interproscan
GO:0048473 all species →	Biological Process	D-methionine transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02072	metI; D-methionine transport system permease protein	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.