Detailed information of BRAKERKREP00000022870.1 in Hydra viridissima

Genomic Location: :...
NR annotation: WP_241051852.1, valine--tRNA ligase [Achromobacter xylosoxidans]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7WHM6Valine--tRNA ligase OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) OX=257310 GN=valS PE=3 SV=1
Q7VWK6Valine--tRNA ligase OS=Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) OX=257313 GN=valS PE=3 SV=1
Q7W6P3Valine--tRNA ligase OS=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) OX=257311 GN=valS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10458Val_tRNA-synt_CValyl tRNA synthetase tRNA binding armDomainInterproscan
PF08264Anticodon_1Anticodon-binding domain of tRNA ligaseDomainInterproscan
PF00133tRNA-synt_1tRNA synthetases class I (I, L, M and V)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002303FamilyValine-tRNA ligaseInterproscan
IPR019499DomainValyl-tRNA synthetase, tRNA-binding armInterproscan
IPR001412Conserved_siteAminoacyl-tRNA synthetase, class I, conserved siteInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR013155DomainMethionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-bindingInterproscan
IPR037118Homologous_superfamilyValyl-tRNA synthetase, tRNA-binding arm superfamilyInterproscan
IPR010978Homologous_superfamilyClass I and II aminoacyl-tRNA synthetase, tRNA-binding armInterproscan
IPR009008Homologous_superfamilyValyl/Leucyl/Isoleucyl-tRNA synthetase, editing domainInterproscan
IPR009080Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan
IPR033705DomainValyl tRNA synthetase, anticodon-binding domainInterproscan
IPR002300DomainAminoacyl-tRNA synthetase, class IaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11946VALYL-TRNA SYNTHETASESInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004832Molecular Functionvaline-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006438Biological Processvalyl-tRNA aminoacylationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0002161Molecular Functionaminoacyl-tRNA editing activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01873VARS, valS; valyl-tRNA synthetaseEC:6.1.1.9
Transfer RNA biogenesisko03016deepkoala

TOP