Genomic Location: not available for this species
NR annotation: WP_094820431.1, oligoribonuclease [Bordetella genomosp. 4]
Species abbreviation HVIRI · all data for this species · gene families
| CDS |
| BRAKERKRET00000022906 |
| Transcript |
| BRAKERKRET00000022906 |
| Protein |
| BRAKERKREP00000022906.1 |
| UniProt accession | Description |
|---|---|
| Q7WGX3 | Oligoribonuclease OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) OX=257310 GN=orn PE=3 SV=1 |
| Q7W9T4 | Oligoribonuclease OS=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) OX=257311 GN=orn PE=3 SV=1 |
| Q7VVH7 | Oligoribonuclease OS=Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) OX=257313 GN=orn PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005349 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00929 all species → | RNase_T | Exonuclease | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036397 all species → | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR022894 all species → | Family | Oligoribonuclease | Interproscan |
| IPR013520 all species → | Domain | Exonuclease, RNase T/DNA polymerase III | Interproscan |
| IPR012337 all species → | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11046 all species → | OLIGORIBONUCLEASE, MITOCHONDRIAL | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0000175 all species → | Molecular Function | 3'-5'-RNA exonuclease activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K13288 | orn, REX2, REXO2; oligoribonuclease | EC:3.1.-.- | Ribosome biogenesis | ko03009 | deepkoala |
