Gene detail

Detailed information of BRAKERKREP00000022981.1 in Hydra viridissima

Genomic Location: not available for this species
NR annotation: WP_063581439.1, uracil-DNA glycosylase [Achromobacter ruhlandii]
Species Hydra viridissima · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7WQW5	Uracil-DNA glycosylase OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) OX=257310 GN=ung PE=3 SV=1
Q7W1Y7	Uracil-DNA glycosylase OS=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) OX=257311 GN=ung PE=3 SV=1
Q7VUM8	Uracil-DNA glycosylase OS=Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) OX=257313 GN=ung PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001192 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03167 all species →	UDG	Uracil DNA glycosylase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005122 all species →	Domain	Uracil-DNA glycosylase-like	Interproscan
IPR002043 all species →	Family	Uracil-DNA glycosylase family 1	Interproscan
IPR036895 all species →	Homologous_superfamily	Uracil-DNA glycosylase-like domain superfamily	Interproscan
IPR018085 all species →	Active_site	Uracil-DNA glycosylase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11264 all species →	URACIL-DNA GLYCOSYLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004844 all species →	Molecular Function	uracil DNA N-glycosylase activity	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0006284 all species →	Biological Process	base-excision repair	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0097510 all species →	Biological Process	base-excision repair, AP site formation via deaminated base removal	Interproscan
GO:0016799 all species →	Molecular Function	hydrolase activity, hydrolyzing N-glycosyl compounds	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03648	UNG, UDG; uracil-DNA glycosylase	EC:3.2.2.27	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.