Detailed information of BRAKERKREP00000023013.1 in Hydra viridissima

Genomic Location: not available for this species
NR annotation: WP_066410317.1, lipopolysaccharide assembly protein LapB [Bordetella ansorpii]
Species Hydra viridissima · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P0AB60Lipopolysaccharide assembly protein B OS=Escherichia coli O157:H7 OX=83334 GN=lapB PE=1 SV=1
P0AB59Lipopolysaccharide assembly protein B OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=lapB PE=1 SV=1
P0AB58Lipopolysaccharide assembly protein B OS=Escherichia coli (strain K12) OX=83333 GN=lapB PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0040623 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18073
all species →		Rubredoxin_2Rubredoxin metal binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR030865
all species →		FamilyLipopolysaccharide assembly protein BInterproscan
IPR041166
all species →		DomainLapB, rubredoxin metal binding domainInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
No PANTHER signature was detected for BRAKERKREP00000023013.1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0008653
all species →		Biological Processlipopolysaccharide metabolic processInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERKREP00000023013.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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