Gene detail

Detailed information of BRAKERKREP00000023104.1 in Hydra viridissima

Genomic Location: :...
NR annotation: KAG4081062.1, hypothetical protein HA402_010233 [Bradysia odoriphaga]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERKRET00000023104

ATGGGCCACGGCAGCGACCACGCCTGGGATGAAGCGGTTTATCTAGTGCTGCATGCTTTACATTTGCCACCGGACATACTAGAGCCTTTCCTGGACGCGCGTGTATTACGCGAAGAACGCGATCAAGTGCTGCATTTAATCGAGCGGCGGGTCACCGAACGCATACCGGCCGCTTACCTAACGCAGGAGGCATGGCTACGCGGTCGTCGCTTCTACGTCGACCAACGGGTGATCGTGCCGCGTTCGCCCATCGCTGAATTGTTGGACGAAGGGCTAGCACCATGGATTCAAGATCCTGACCGTTTGCGCGCCGTGCTCGATATGTGCACCGGATCGGGTTGTCTAGCCATTCTAGCGGCCCAGGCTTTTCCTTATGCTCAGCTCGATGGGGTGGACATCTGCCCTCAAGCGCTAGAAGTCGCGCAGCGCAACGTGCAAGCATACGGTTTAGAAGACCGCATCGCACTGCAACGTAGCAATCTGTTTGAGCAGTTGGCGCCGCGTGAGTATGACCTTATCATCTGCAATCCGCCTTACGTCAACCAAGCTTCGATGGACACCCTCTCCGCAGAATATCGCCACGAGCCTGCACTGGCTTTGGCCGGAGGCAAGGACGGCATGGCCGTAGTAGGCCGCATCGTGACGCAAGCGGCACAATTTTTAACGGCAGATGGGCTACTGGTTTTAGAAATCGGTCACGAGCGTGCCAATTTTGAGGCAGCGTTTCCCCAGCTCCAACCGATCTGGCTCGATACTGCCCAAGCTTCAGACCAGATTTTGCTATTAACACGCGATCTAGACCTGGACGCAGGCGATTTAAGCTTGCCAGCCGGCTGGCGTATTGCGGCGGTACAGCAAGAAATCGCCGACGATGAACGGCCTGCGTGTGAATTCGTGATTGACGGTGATGCGCACCTGCGTGCACTGCAGCGCCGCCGCGCTGCGTTAAGCGAAAGTGAAGGCGGCGAAATTGCCGAGCTGGAAGCGGCATTGGTAGAAGCCGGCGCTTGGAGCGCCGCCTCGCGGGCCGAACAACTATTGGCAGGTCTTGGCTTCAAGTCGGACGAATGGCAGCAGCCAGTAGCAAAATTTTCCGGGGGCTGGCGCATGCGGTTGGCGCTGGCACGCACCCTGATGGCGCCTTCGGACCTGTTATTGCTAGACGAACCGACCAACCATCTAGACCTGGACGCCATGCTGTGGGTGGAAAAATGGCTAGCAACCTATCCGGGCACTGTACTGCTTATTTCGCACGACAGCGAATTTTTAGACGCCGCCGCAAAGTCTATCTTGCATTTTGAAGGCGGCAAGCTCATCCGTTACCGCGGCGGCCATCAAGACTTTCTCACCCAGCGCGCCGAACGCCTGCGCCAAAGCCATATTGCCTACAGTCGACAAACGCGCGAAGCAGCACGACTGCGCAGCTTCATCGACCGCTTCAAAGCCAAAGCGACGAAGGCCAAACAAGCGCAAAGTCGGGTTAAAGCGCTGGCCCGCATGGAGGTCTTGGCGCCGCTACAGGTTGAAGCCGGTATCGAAATACGCATTCCCGCGCCGGACCACTTGCCCGATCCGCTGCTGACGTTGGAACAACTATCAGCTGGCTACACCACTGCCGATGGCGTTGCTGCACCTGTTTTGCGCGACATCAACTTGGTGGTGCGCGCGGGCAGCCGTATCGGTATATTGGGCGCTAACGGCGCCGGTAAAAGCACGTTCATCAAAACTTTGGCCGAAGAGTTGGCGCCGCTAGCCGGCGTACGTCGAGCGTCACGGGGGTTAGCCATTGGCTACTTTCATCAGCATCAGCTCGATATGCTGGATGTGGACGATACACCGCTTGCGCATTTAGCAAAGCTTGCGCCCGCTGCACGCGAACAGGAATTGCGCAATTACTTAGGCGGGTTCGGCTTTTCCGGAGATAGTGTCCTTAACAAAGTCGGGCCCATGTCCGGCGGCGAGAAGGCACGCTTGGCCCTGTCTCTCATTGTTTGGCAAAAAccaaatttacttttgttggACGAACCGAGTAACCACCTAGATGTGGCCACGCGCGAAGCCCTGTCCACCGCGCTCGCAGAGTTTGCCGGCAGCATGCTGCTCGTCTCGCATGATAGGCATTTGCTACGCACGACGGTGGATAGTTTTTGGATCGTTGCAGATGGCCGCGTGCAAGAATTCAATGGCGATCTAGAAGACTACCGAGAGTGGCTGATCCGCCGCAACACTGAAGCGCGTAACGATTCGGCAGGGTCAACAGGTGTCCAGCCCAGCTTGGATCGCAAGCAGCAGCGCCGCCTAGAGGCGCAAGAGCGTCAGCGATTGGCCGCTTTGCGGCGGCCGCTGGAACAACGGCTGACCGAGGTGGAAACCGAGCTGGATCAGGCCCGTGCGAGGATGCAGGCGCTAGACGCCATAATTGCTGATCCCGCGCTTTATTCCGACGCCAGGCGATCAGAGCGGCAAGCCGTCATGGCCGAACAGGGTGAACTCGCCAAACGCGTCAACGAAATGGAAGAAATTTGGTTGGATGTTCAGGAATCGCTGGAAGGCTTAAGCTCTTCTTCTGCCTAA

Transcript

BRAKERKRET00000023104

Protein

Uniprot

Uniprot term	Description
P63390	Probable ATP-binding protein YheS OS=Escherichia coli O157:H7 OX=83334 GN=yheS PE=3 SV=1
P63389	Probable ATP-binding protein YheS OS=Escherichia coli (strain K12) OX=83333 GN=yheS PE=1 SV=1
A0A0H2VBH0	Probable ATP-binding protein YheS OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=yheS PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00005	ABC_tran	ABC transporter	Domain	Interproscan
PF05175	MTS	Methyltransferase small domain	Domain	Interproscan
PF12848	ABC_tran_Xtn	ABC transporter	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR003439	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR007848	Domain	Methyltransferase small domain	Interproscan
IPR002052	Conserved_site	DNA methylase, N-6 adenine-specific, conserved site	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR017871	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR017127	Family	Ribosomal protein uL3 glutamine methyltransferase	Interproscan
IPR050611	Family	ATP-binding cassette sub-family F member, EF3 subfamily	Interproscan
IPR032781	Domain	ABC-transporter extension domain	Interproscan
IPR004556	Family	Methyltransferase HemK-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19211	ATP-BINDING TRANSPORT PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0032259	Biological Process	methylation	Interproscan
GO:0006479	Biological Process	protein methylation	Interproscan
GO:0036009	Molecular Function	protein-glutamine N-methyltransferase activity	Interproscan
GO:0008276	Molecular Function	protein methyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06158	ABCF3; ATP-binding cassette, subfamily F, member 3	-	Translation factors	ko03012	deepkoala