Detailed information of BRAKERKREP00000023406.1 in Hydra viridissima

Genomic Location: :...
NR annotation: WP_013233863.1, deoxyribodipyrimidine photo-lyase [Herbaspirillum seropedicae]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9KNA8Deoxyribodipyrimidine photo-lyase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=phrA PE=1 SV=1
P00914Deoxyribodipyrimidine photo-lyase OS=Escherichia coli (strain K12) OX=83333 GN=phrB PE=1 SV=1
Q04449Deoxyribodipyrimidine photo-lyase OS=Alkalihalophilus pseudofirmus (strain ATCC BAA-2126 / JCM 17055 / OF4) OX=398511 GN=phr PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00875DNA_photolyaseDNA photolyaseDomainInterproscan
PF03441FAD_binding_7FAD binding domain of DNA photolyaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR036155Homologous_superfamilyCryptochrome/photolyase, N-terminal domain superfamilyInterproscan
IPR018394Conserved_siteCryptochrome/DNA photolyase class 1, conserved site, C-terminalInterproscan
IPR006050DomainDNA photolyase, N-terminalInterproscan
IPR036134Homologous_superfamilyCryptochrome/DNA photolyase, FAD-binding domain-like superfamilyInterproscan
IPR002081FamilyCryptochrome/DNA photolyase class 1Interproscan
IPR005101DomainCryptochrome/DNA photolyase, FAD-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11455CRYPTOCHROMEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003904Molecular Functiondeoxyribodipyrimidine photo-lyase activityInterproscan
GO:0009416Biological Processresponse to light stimulusInterproscan
GO:0071949Molecular FunctionFAD bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01669phr, PHR1; deoxyribodipyrimidine photo-lyaseEC:4.1.99.3
DNA repair and recombination proteinsko03400deepkoala

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