Gene detail

Detailed information of BRAKERKREP00000023480.1 in Hydra viridissima

Genomic Location: :...
NR annotation: WP_054502145.1, MULTISPECIES: trigger factor [Achromobacter]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
A9IR57	Trigger factor OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) OX=340100 GN=tig PE=3 SV=1
Q7VXI8	Trigger factor OS=Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) OX=257313 GN=tig PE=3 SV=1
Q7WK84	Trigger factor OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) OX=257310 GN=tig PE=3 SV=1

Gene family	Subfamily
Transcription Factors Family	CSD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00313	CSD	'Cold-shock' DNA-binding domain	Domain	Interproscan
PF00254	FKBP_C	FKBP-type peptidyl-prolyl cis-trans isomerase	Domain	Interproscan
PF05698	Trigger_C	Bacterial trigger factor protein (TF) C-terminus	Family	Interproscan
PF05697	Trigger_N	Bacterial trigger factor protein (TF)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005215	Family	Trigger factor	Interproscan
IPR002059	Domain	Cold-shock protein, DNA-binding	Interproscan
IPR046357	Homologous_superfamily	Peptidyl-prolyl cis-trans isomerase domain superfamily	Interproscan
IPR001179	Domain	FKBP-type peptidyl-prolyl cis-trans isomerase domain	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR037041	Homologous_superfamily	Trigger factor, C-terminal domain superfamily	Interproscan
IPR011129	Domain	Cold shock domain	Interproscan
IPR008880	Domain	Trigger factor, C-terminal	Interproscan
IPR019844	Domain	Cold-shock (CSD) domain	Interproscan
IPR036611	Homologous_superfamily	Trigger factor ribosome-binding domain superfamily	Interproscan
IPR008881	Domain	Trigger factor, ribosome-binding, bacterial	Interproscan
IPR027304	Homologous_superfamily	Trigger factor/SurA domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR30560	TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015031	Biological Process	protein transport	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003755	Molecular Function	peptidyl-prolyl cis-trans isomerase activity	Interproscan
GO:0043022	Molecular Function	ribosome binding	Interproscan
GO:0043335	Biological Process	protein unfolding	Interproscan
GO:0044183	Molecular Function	protein folding chaperone	Interproscan
GO:0051083	Biological Process	'de novo' cotranslational protein folding	Interproscan
GO:0061077	Biological Process	chaperone-mediated protein folding	Interproscan
GO:0006457	Biological Process	protein folding	Interproscan