Detailed information of BRAKERKREP00000023551.1 in Hydra viridissima

Genomic Location: :...
NR annotation: KAF4516525.1, hypothetical protein B566_EDAN003272 [Ephemera danica]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A9IJ30Large ribosomal subunit protein uL1 OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) OX=340100 GN=rplA PE=3 SV=1
Q2L2N3Large ribosomal subunit protein uL1 OS=Bordetella avium (strain 197N) OX=360910 GN=rplA PE=3 SV=1
Q7WRE2Large ribosomal subunit protein uL1 OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) OX=257310 GN=rplA PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00298Ribosomal_L11Ribosomal protein L11, RNA binding domainDomainInterproscan
PF00466Ribosomal_L10Ribosomal protein L10FamilyInterproscan
PF00687Ribosomal_L1Ribosomal protein L1p/L10e familyDomainInterproscan
PF03946Ribosomal_L11_NRibosomal protein L11, N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000911FamilyRibosomal protein uL11Interproscan
IPR005878FamilyLarge ribosomal subunit protein uL1, bacterial-typeInterproscan
IPR020783DomainLarge ribosomal subunit protein uL11, C-terminalInterproscan
IPR036796Homologous_superfamilyLarge ribosomal subunit protein uL11, N-terminal domain superfamilyInterproscan
IPR043141Homologous_superfamilyLarge ribosomal subunit protein uL10-like domain superfamilyInterproscan
IPR001790FamilyLarge ribosomal subunit protein uL10Interproscan
IPR036769Homologous_superfamilyLarge ribosomal subunit protein uL11, C-terminal domain superfamilyInterproscan
IPR047865FamilyLarge ribosomal subunit protein uL10, bacterial typeInterproscan
IPR006519FamilyLarge ribosomal subunit protein uL11, bacterial-typeInterproscan
IPR028364FamilyRibosomal protein uL1/ribosomal biogenesis proteinInterproscan
IPR016095Homologous_superfamilyLarge ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainInterproscan
IPR020785Conserved_siteLarge ribosomal subunit protein uL11, conserved siteInterproscan
IPR002363Conserved_siteLarge ribosomal subunit protein uL10, conserved site, bacteriaInterproscan
IPR022973FamilyLarge ribosomal subunit protein uL10, bacterialInterproscan
IPR020784DomainLarge ribosomal subunit protein uL11, N-terminalInterproscan
IPR023674Homologous_superfamilyRibosomal protein uL1-likeInterproscan
IPR023673Conserved_siteLarge ribosomal subunit protein uL1, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR3642754S RIBOSOMAL PROTEIN L1, MITOCHONDRIALInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0022625Cellular Componentcytosolic large ribosomal subunitInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0015934Cellular Componentlarge ribosomal subunitInterproscan

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