Gene detail

Detailed information of BRAKERKREP00000023562.1 in Hydra viridissima

Genomic Location: :...
NR annotation: KAF1852479.1, hypothetical protein Lal_00037211 [Lupinus albus]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERKRET00000023562

ATGCGTTTTGTCCAAAGAGCACTCACCTTCGACGATGTGTTGCTGGTGCCTGCTTATTCCGAGGTGTTGCCGCGCAACACCTCTTTGGTCACCCGTCTTACCCGCAACATCACTTTGAATATTCCGCTGATCTCGGCTGCGATGGACTCCGTAACCGAGTCGCGGCTAGCTATTGCCATGGCGCAAGAGGGCGGCATTGGCATCATCCATAAGAACCTAAGCGCCGCTCAGCAAGCGCGCGAAGTAGCCCGTGTCAAGCGTCATGAATTCGGTATAGTTATCGACCCCATTACGGTGACCCCCCAAATGAAAGTGCGCGACGCCATCGCGTTACAGCGCCAGCACGGTATTTCCGGCTTGCCCGTGGTCGAAGGCGGCAAAGTGGTGGGCATCGTCACCAACCGTGATTTACGCTTTGAAGATCGGTTAGATGAGTCGCTGCGTACCGTCATGACCCCGCAGCAACGCTTGGTCACTATGAAAGAAGGCGGCACGTTAGAAGAAGCCCAACGTCTCATGCATAAGCATCGCCTAGAGCGCGTGCTTATTGTTAACGACGCTTTCGAGTTGCGTGGTCTAGCGACCGTCaaagatattgttaaaaacactGAACATCCTAACGCTAATAAAGATGCGCAGGGGCAGCTGCGCGTGGGTGCGGCCGTCGGCGTCGGCGCTGGTACGGAAGAGCGGGTGGAAAAACTGGTGGCCGCCGGCGCCGATGTGATCATTGTCGATACGGCGCACGGCCACTCTCTGGGTGTATTGCAACGAGTGCGCTGGGTCAAGAAGCATTTTCCTAAGGTGGAAGTCATAGGCGGCAATATTGCCACCGCTGCGGCTGCGCGCGCCCTGGTTGAGTATGGCGTCGATGGGGTCAAAGTCGGCATTGGGCCCGGCTCTATTTGCACCACCCGCATCGTGGCTGGGGTGGGCGTGCCGCAAATTACCGCTATTTCCGATGTCGCCAAAGCGCTGGAAGGGACGGGCGTGCCGCTTATCGCCGACGGTGGCATCCGTTATTCGGGCGATATTGCCAAGGCGCTAGCGGCTGGCGCTTTTGCCTGCATGATGGGGGGCATGTTTGCCGGCACCGAGGAAGCGCCCGGCGACGTCGTGCTGTTCCAAGGTCGTTCGTACAAATCGTACCGCGGTATGGGTAGCCTAGGGGCCATGGCGGAAGGATCGGCCGATCGCTATTTTCAAGACCCGGCCAACAATGCCGACAAGCTGGTGCCCGAAGGCATTGAAGGCCGCGTGCCTTATAAAGGCAGCGTGTTGGCCATTATTTACCAGCTGGTGGGCGGTATTCGTGCCTCCATGGGATATTGTGGTTGCGCCACCATCGATGAAATGCGCACCAGGACCGAGTTTGTTGAAATCACTGCGGCCGGGGTGCACTACGGGTCACAAGTCACTCAGCTGATTGCCCGCCGCGTACGTGAAGCCGGCGTGTATTCTGAAGTTCATCCCGGCGATGTGGATGATGCATTTGTACGCGATCAGGCCCAGCAAGGGCTAAAAGGCGTCATTCTTTCAGGTAGCCACGCCTCGGCCTACGTAGACGGCTCGTTACGTGTGCCAGCGGTGGTGTTTGAGCTGGGTGTGCCCGTGCTTGGCATTTGCTACGGCATGCAGTCCATGGCGCAGCAGTTGGGCGGTAAGGTAAGTTACGCCGAGCACCGCGAGTTTGGTTACGCCGAAGTGCAAACCCATGGTCATACCCGTCTGCTTGAAGGCCTAGCCGACTTTACTACACCACCAGGCCACCGCATGCTAAAGGTGTGGATGAGCCACGGCGACCAAGTTATCGCGTTGCCGCCGGGCTTTAAGCTCATGGCTTCCACGCTTTCATGCCCTATTGCTGGTATGGCCGATGAATCTCGCGGCTTCTACGCTGTGCAGTTTCATCCTGAAGTCACCCATACCTTGCAAGGCAAGGCCATGCTGGCGCGATTTGTTAAGGATATTTGTGGCTGCATGGGCGATTGGAATATGCCCGATTACGTGTCCGAAGCCGTGGCGCGCATACGTGAGCAAGTCGGCAGCGATGAAGTCATTTTGGGATTGTCGGGTGGGCTTGATTCTTCCGTGGCTGCGGCGCTTATATACAAGGCAATCGGAGATCAACTTACTTGTGTATTTGTCGATCATGGCCTGCTGCGCCTAAACGAAGTCCAGCAGGTGATGAAGACTTTCGCCGATAGTATCGGCCTCAAGATTATTCACGTCGATGCCGCCGAACAATTTATGAACAAGCTGGCTGGCGTGTCTGACCCAGAGGCCAAGCGCAAGATTATCGGACGCGAGTTCGTGGACATATTCCAAGTCGAAGCTGGCAAACGACAGAACGCGAAATGGTTGGCTCAGGGCACCATTTATTCCGACGTCATTGAATCAGCAGGCGCCAAAACCGGCAAGGCTACTTCCATTAAGTCGCACCACAATGTGGGCGGCTTACCCGACACCTTAAATCTACGGCTTTTGGAGCCCTTGCGCGAGTTATTTAAGGACGAGGTACGTGAGCTCGGCATTACGCTGGGGCTGCCTACCGAAATGGTATATCGCCATCCGTTTCCAGGTCCAGGTTTAAGCGTCCGCATTCTTGGCGAAGTTAAGCGCGAATACGCCGAACTATTGCGGCGAGCTGACGCCATCTTTATTGAAGAACTGCGCGGCGCCATCGATCCCGCCACCCAAAAATCCTGGTACGAATTGACTTCACAAGCGTTTGTGGTGTTCTTACCGGTTAAATCAGTAGGCGTCATGGGCGACGGACGCACCTACGAATACGTGGTGGCACTTCGCGCCGTACAAACCGCCGATTTTATGTCGGCCGAGTGGGCGCCGCTGCCCCATGCCTTGCTGGCTAAGGTGTCGGCGCGCATCATTAACGAAGTGCGGGGTATTAATAGGGTCGTCTACGATGTATCGAACAAGCCGCCCGCGACGATAGAGTGGGAGTGA

Transcript

BRAKERKRET00000023562

Protein

Uniprot

Uniprot term	Description
A9IKK0	GMP synthase [glutamine-hydrolyzing] OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) OX=340100 GN=guaA PE=3 SV=1
Q7WK13	GMP synthase [glutamine-hydrolyzing] OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) OX=257310 GN=guaA PE=3 SV=1
Q7VVM4	GMP synthase [glutamine-hydrolyzing] OS=Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) OX=257313 GN=guaA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02540	NAD_synthase	NAD synthase	Domain	Interproscan
PF00117	GATase	Glutamine amidotransferase class-I	Domain	Interproscan
PF00478	IMPDH	IMP dehydrogenase / GMP reductase domain	Domain	Interproscan
PF00958	GMP_synt_C	GMP synthase C terminal domain	Domain	Interproscan
PF00571	CBS	CBS domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005990	Family	Inosine-5'-monophosphate dehydrogenase	Interproscan
IPR004739	Domain	GMP synthase, glutamine amidotransferase	Interproscan
IPR001674	Domain	GMP synthase, C-terminal	Interproscan
IPR025777	Domain	GMP synthetase ATP pyrophosphatase domain	Interproscan
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR046342	Homologous_superfamily	CBS domain superfamily	Interproscan
IPR029062	Homologous_superfamily	Class I glutamine amidotransferase-like	Interproscan
IPR000644	Domain	CBS domain	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR022955	Family	GMP synthase	Interproscan
IPR001093	Domain	IMP dehydrogenase/GMP reductase	Interproscan
IPR022310	Domain	NAD/GMP synthase	Interproscan
IPR015875	Conserved_site	IMP dehydrogenase / GMP reductase, conserved site	Interproscan
IPR017926	Domain	Glutamine amidotransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11922	GMP SYNTHASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003938	Molecular Function	IMP dehydrogenase activity	Interproscan
GO:0006164	Biological Process	purine nucleotide biosynthetic process	Interproscan
GO:0003922	Molecular Function	GMP synthase (glutamine-hydrolyzing) activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006177	Biological Process	GMP biosynthetic process	Interproscan
GO:0003921	Molecular Function	GMP synthase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan