Genomic Location: not available for this species
NR annotation: WP_086073585.1, malto-oligosyltrehalose trehalohydrolase [Bordetella genomosp. 9]
Species Hydra viridissima · all data for this species · gene families
| CDS |
| BRAKERKRET00000023717 |
| Transcript |
| BRAKERKRET00000023717 |
| Protein |
| BRAKERKREP00000023717.1 |
| UniProt accession | Description |
|---|---|
| Q9RX51 | Malto-oligosyltrehalose trehalohydrolase OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1) OX=243230 GN=treZ PE=1 SV=1 |
| P95867 | Malto-oligosyltrehalose trehalohydrolase OS=Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) OX=273057 GN=treZ PE=1 SV=1 |
| Q55088 | Malto-oligosyltrehalose trehalohydrolase OS=Saccharolobus solfataricus OX=2287 GN=treZ PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0064039 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF11941 all species → | DUF3459 | Domain of unknown function (DUF3459) | Domain | Interproscan |
| PF00128 all species → | Alpha-amylase | Alpha amylase, catalytic domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013783 all species → | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR022567 all species → | Domain | Glycosyl hydrolase, C-terminal (DUF3459) | Interproscan |
| IPR012768 all species → | Family | Malto-oligosyltrehalose trehalohydrolase | Interproscan |
| IPR014756 all species → | Homologous_superfamily | Immunoglobulin E-set | Interproscan |
| IPR044901 all species → | Homologous_superfamily | Malto-oligosyltrehalose trehalohydrolase, E-set domain superfamily | Interproscan |
| IPR006047 all species → | Domain | Glycosyl hydrolase, family 13, catalytic domain | Interproscan |
| IPR017853 all species → | Homologous_superfamily | Glycoside hydrolase superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43651 all species → | 1,4-ALPHA-GLUCAN-BRANCHING ENZYME | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004553 all species → | Molecular Function | hydrolase activity, hydrolyzing O-glycosyl compounds | Interproscan |
| GO:0005992 all species → | Biological Process | trehalose biosynthetic process | Interproscan |
| GO:0005975 all species → | Biological Process | carbohydrate metabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K01236 | treZ, glgZ; maltooligosyltrehalose trehalohydrolase | EC:3.2.1.141 | Starch and sucrose metabolism | ko00500 | deepkoala |
Transcript abundance of BRAKERKREP00000023717.1 across 29 RNA-seq samples of Hydra viridissima. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole body | 18 | 0 | 0.00 | 0.00 | |
| Whole | 6 | 0 | 0.00 | 0.00 | |
| aposymbioic hydra M9 strain · aposymbioic hydra rep1 | 1 | 0 | 0.00 | 0.00 | |
| aposymbioic hydra M9 strain · aposymbioic hydra rep2 | 1 | 0 | 0.00 | 0.00 | |
| symbioic hydra M9 strain · symbioic hydra rep1 | 1 | 0 | 0.00 | 0.00 | |
| symbioic hydra M9 strain · symbioic hydra rep2 | 1 | 0 | 0.00 | 0.00 | |
| unannotated | 1 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (HVIRI_TPM,
StringTie quantification over 29 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
