Genomic Location: QPEY01000525.1:410984...434181
NR annotation: XP_047144425.1, katanin-interacting protein isoform X2 [Hydra vulgaris]
Species Hydra viridissima · all data for this species · gene families
| UniProt accession | Description |
|---|
| Q8C753 | Katanin-interacting protein OS=Mus musculus OX=10090 GN=Katnip PE=1 SV=2 |
| O60303 | Katanin-interacting protein OS=Homo sapiens OX=9606 GN=KATNIP PE=1 SV=4 |
| Q5XK85 | Protein KATNIP homolog OS=Xenopus laevis OX=8355 PE=2 SV=1 |
| Family type | Membership / link |
|---|
| Orthogroup (gene family) | OG0002727 (this species only) |
No Gene Ontology signature was recorded for BRAKERKREP00000023963.1 in Hydra viridissima.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the
Functional Domain Search page, which searches all 148 annotated genomes at once.
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|
| K22858 | JBTS26; protein JBTS26 | - | Cilium and associated proteins | ko03037 | deepkoala |
Searching by KO or pathway ID across
all species is available on the
KEGG Pathway page.
Expression pattern (RNA-seq)
Transcript abundance of BRAKERKREP00000023963.1 across
29 RNA-seq samples of Hydra viridissima.
This gene has no row in the species' RNA-seq expression matrix, so every value below
is shown as zero — the matrix simply does not cover this transcript.
Values are TPM (transcripts per million) from the StringTie quantification; one bar is one
sample, grouped and coloured by condition, sorted by expression within each group.
29Samples
0TPM > 0
7Conditions
0.0Max TPM
0.0Mean TPM
By condition
| Condition | Samples | TPM > 0 |
Mean TPM | Max TPM | Mean, relative to max |
| whole body |
18 |
0 |
0.00 |
0.00 |
|
| Whole |
6 |
0 |
0.00 |
0.00 |
|
| aposymbioic hydra M9 strain · aposymbioic hydra rep1 |
1 |
0 |
0.00 |
0.00 |
|
| aposymbioic hydra M9 strain · aposymbioic hydra rep2 |
1 |
0 |
0.00 |
0.00 |
|
| symbioic hydra M9 strain · symbioic hydra rep1 |
1 |
0 |
0.00 |
0.00 |
|
| symbioic hydra M9 strain · symbioic hydra rep2 |
1 |
0 |
0.00 |
0.00 |
|
| unannotated |
1 |
0 |
0.00 |
0.00 |
|
Source: CnidoSite RNA-seq expression matrices (HVIRI_TPM,
StringTie quantification over 29 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
