Gene detail

Detailed information of BRAKERKREP00000024325.1 in Hydra viridissima

Genomic Location: :...
NR annotation: XP_047126681.1, protein ELYS-like [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERKRET00000024325

ATGTATGGACGTATGGAACCACTTtgtccattttttatattttattccaTGACAGATGTGGCAGAAAAGTTTCTTCCTGTTGGTTTAGtggatatttttattgatggaTGCAGTTGGAATAACTTTCGTTCTGTGGCTGGACCACAAAGTGAACAGTTTTATTGGccttcatcatcttcatttaAAGCAGTTTGTGTATCTGAAACTGGCTGCATTTTTGCTGAAATGCTTGGTACACAGAGGCAGATATTGGCTGATATTCATCAAATGGGGACAGATACTTTTTTGGAATCACAAGAGTTAATTCAATCATGCTGGATCAGTGGCTTATTGAGTAACTTTGATATTAGAAGACCAGACAATGATAAGCGTAATACAGAAGCACTACTTACCTTGTGTTTGGAACATGGAGATATGAGTTTTATTACAAGTTGTGTGAAGAAATGGTCTTATGGAAGTGTTACACACACTGGCTACagtataaaacttatatatgaCTGGGCATGGAACCAAGTTGTACagcataaaaaagatttagatgAACTCcATGCACCACTTTTCTGCAGTTTGACTGAAGAAttagaagaagaaaatgtttgTGCCATGAAAAAGAATTCAGTAGAACTTCAGTACCTTGTgggaatttttaaagaaattgaaagaGCAAAAGCTTTGACATTAGAAGAAGGAGAAAAAGAACTCaaaactagaataaaaattatcagttaCCTTTCACtgtattgtgATGTTTTACTACTGCTCATTGATAGTCATGTCCTCCCAGAGCttgaccaaaaaaagaaaaaatctccAAATAAGTTATCTTACCCAATTGAAGTGTTGACAGATTTTTATGATGCTCGTCGTACAGAGATTTCAAAGAAGATTAATTCTGAGGTGTGTTTGTTCATTGACTTGATGTTGAATCGTTTGGAAACATATGAAAATTCATCTCTAGAAGTTCATTGTGATGATGAAgcaaagttaacaaaatacCCTCCTTTTTCAATGGAGataatgTGCTCTTTCTTCCTCCAAAATCTTTCTGAAGATGAATTACCACTACTTCTGTTCTATTATTGGATCTTAGATTTATGTGAATGTACTAAAGAACTTCAAGTCAGCAATACATCTGAAAAAATCAGAGAGTGTTTTAAACTTTCCCAAAATTCATATTTACTTGTACAATCTTTCTGGCTACTAGATCATGAATTGTATAGGGAAGCAATGGAATGTTTGGCACAGTTTAACATGAGTATACCATCTGTTTACTATGTACATATTATACGTTTGTTATACACCCAACAAGAAATAAATCTCCTTTTAGCTTTTTGTTCCTGTAAGGAACCTTCTGGTGTTTTGGAATTGAATGATGTCAAGttcattattaaaatctttttgaatttaaaaatgttaccaAGTGCATACATGTTTCAGAGCTTTTACAGCAAACAGTCAGTTAAAGAGCaggtttttaatatttttctggaGCATTGCAAATCTAATGGTTTGTTAGGAAAATTAATTGGCTTATCCCTATCTCCTGAAGAAGAGttGCTGTTTCAAGCATATTTGGAATCTAATCAGGATAACAGCAATTacttaatgatattttatctAGAAAGGCGAATGTATTCTAAAGCCAtcaaactttcaaaacaatttaaaaataacaacaatGTAATGCTAGATCATACTATCCAGGATCAAATAAATACACGATGTCTTCTTGTTGGAGGATTTGTCAAAATGTTACCTCTTtcacagcaaaaaaaaatttatagtgGCTCATCAATCAAAAGACATACAAATATCATTCTTAATGGAGcagATGGGAACTATGCTCCACTTTCTACTGTTGTACAAAAAAGTCGAATGAGCTATCCTTCAGCTGAACTCTCTTTGTTGTACAAAAAATACCAGCAAGGTAGTAAATTGGAGTCTAATTCTTCAGGAgcacttttttcaaatcaaaaaagaagaaaatcaaCTCTTTTTGATAGTGAAGTGATCTCTCCAAGCAAGAAACCCAAAGATATGCCCATGCCCAAATTTGACCAGACATTAACTTcaaatacatcagcttctgCTCGaaaacatgtGTATTCTGGCTCTGATGCTTACTTGTTGTTAAAAACACCACCAGCTCGGCAGTATAAAAAGTTCTCCCAATCTGTTGCAACACACAACAAAACACCTCAATCTATTCTTAAGcCATTAAGCAAAACTGTCTTGCAATCAAAAGAAAGTGTTTCTGAAGCATCACAAaagactttatttaaattacctGAACAAACATCGTCTAGAAAGATCCGATTTGTTGGTTTCAATTCTCCAAATACCACATCACCTCTTGAAACTAatgaagaaactaaaaaatcacatatttttgatgattctTTTTGCAGCAGTGTAAAGAGCTCTGAAATTCAAGTTAACTCTCCAACAATACAATTTAATGACGAAAAAGAGATAGAAAAAGAGCTTACAGGTACAGATGTTCATTTAGAACAAAAATCAGATGAAAGTATCAATGAAAGTTTCCTAAGCTTAGATTCAAGTTATTCTATGTCTGTTAACGAAATACTCGAATCTCTGAACTCTAAAAAAGCAGAATACAAAAGTGgtatcagtttaaaaatagagCAACGTAATCAAACTGAGGAATTAAAATCACCTACtgctttattaaatttagaaacaaatgaaaatgagatTTGTGATTACAAAAACAGCTCTGCTAGTATTTTAGTGGAGTTGCAggaaaattcatttaatgaaTTAGCAGCAAATTCAACAGAGTTACCTACAGAAGCAAATAGATCTTCTAAAGAACAAAGTCCTGATAACACTATTTTGCTATCTTCAAGCGATGATGAGACCTCTAAAGTTGAAGAGCTTACATCAATTGATGATGACTTTTCTGAAGATGAAGTTGACAAATTATCCAAATGCAGTGATGATGGAAACCAAAATAATCATGAGTTAGATTGTTATGAATCTTCAGAGGAGCAAGCAAATATGCAGGATGACTTTGCTGAATCTTCTGACATTGAAATACACGAAGAAAGTTTTGTCTGTGAAAACtctatcttaaaaaaaactcctgAAAGAGAACCCATGGAAGCTGATATCAGCATATACAGCAGTTCTCATAAAGAAAGCTTCCacatttatgattttaaagaaaaatcacaAGTATTAGAGTCAGAAGAAAATGATCATGAAATAATCTCAGATAAAGGCGAAGAATCCCTTAAAATCGTTGATAGAGAAAATGTCGAAGaaaatattgagtttttttcttcgcaTAATTCCGCTATATGCAATACAAAAGATAACTTTGAGGGTTCcgattttaatcaaattattgaGGACAATCATAGCGTCAAGTTAGggtataaaagtttaaataaaaatgacaatttttctGTTGACGAAAGTTACCACGAAAACAAGAcggaactaaaaaaattaacttatgaCAACGATGTTTCTATCAACCGTTATAGCGTGGAAAAAGCACTAGATGagaactttaaagaaaaacaaaccatAGTTTTTTCATCTGGAAATCTTGTTGAAGTGAATGACGTTTTTTTGAGTGCTTCGTATGAGAAAGAAAACGAAGAATCGTGTAAAATGATAAGTTCTACTGGAAATGAGcatttaaatacaaatgcaGGGGATTTATTAGTTGCAGACGTTCAAAAGCAATTTCATTCTGATAATAGTGTTGATGTCGCAATTGGTGATTCGGCCTacgaaaatttttatattgactCTGCAGACCAGATTTTGAGAGATAAAGTTGGTtttgatgcaaaaaatttgttatctaTGATGGAAGGAGGTGAAGAGACTTCGAATGCTTGCATGCAAAGTCCAAgtgctttaaaatgtaaacaaaaagttgataaagaGATCATCAACACACCTCTCAGAAGATCTGCCAGAAAGTCGGCAGTGCAAACCAAGATTCAATCAGAGACTTCTATAATTAAACGTAACTTAAATTATTCAGATGAGCAAATTTTCAATTCGTCTCTGATAAGTGGCATCAGCCATACTGTAAATGATTCTATTGAACCtgacaaacaaaaaacgagTGCTGTTGAAATAACTCGATTAAACTCTACTGAACAAGTAAAGCGAACACGCAGAACTACAGGAAGACGActtaaaaatgagcaatacTTACCCTCTAATGTAGAAGACGAGCATAAGTTGCTGATTTGTGATTCTGATACCGTGAACAAATTTGTAGGACAAGAGAATAATACTAAGGTTGAGTATGTAACATTAATGCAACCTCTTCAAATAACTCTAATTAGTGACAATCCGCATGTCGATGAAACTCAAGTTAAACGAGACTCTGAAATTCAGCTAGTTCGAAATCTTCCAAACCAAGAAAAACGACTCCGAAAAATGAGTCAAAATAACAGTCGCGCTCAACGTTTGTCTGAACCTAAAATTGACGAAATTGTTAATACACCTAAAAAATCTTCGAAAAATGGAAACAGTGcccaaaaaacaaataatacgaatgaaaaaaagaacattaaaaattcaCCGAGTCGTGCGCGAAAGAAAACATCCAAAGATGCTGGAAAAACTGCAGAAGATAATGATGATACGAATTCAAACCAAGAAAGTGAAGACCTTAACGAATTAAATCAATCAATGGACACCAGTCGCTCAAGAATAAATCTCTGGTCAAAAAATGCAACaccaagtaaaattttaacccGAAGCAAACAGAAACTTGAGACATCATCACAGGAAATTGTTACCATCAAAACCATCATGCAAACACCAGACAATATAAACATTTCATCGAAAAATAAACATGATGAAGAGGTTTCTTTTAGAAGATATACAAGATCTTCATTTGGTCGAGATGAACAAGTTAAAGACCCTTTGTTAACAATGATCGAAACAGGATCAACACCTGAAACaactcaaaacaaaataaaaagtcggTATGTATCTaatgttaatgatttttatcactga

Transcript

BRAKERKRET00000024325

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13934	ELYS	Nuclear pore complex assembly	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052620	Family	ELYS/MEL-28 Nuclear Assembly Factor	Interproscan
IPR025151	Domain	ELYS-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21583	ELYS PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K25129	AHCTF1, ELYS; protein ELYS	-	Nucleocytoplasmic transport	ko03013	deepkoala