Gene detail

Detailed information of BRAKERKREP00000024402.1 in Hydra viridissima

Genomic Location: not available for this species
NR annotation: XP_002155964.1, protein YIPF1 [Hydra vulgaris]
Species abbreviation HVIRI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6P6G5	Protein YIPF1 OS=Rattus norvegicus OX=10116 GN=Yipf1 PE=2 SV=1
Q91VU1	Protein YIPF1 OS=Mus musculus OX=10090 GN=Yipf1 PE=2 SV=1
Q9Y548	Protein YIPF1 OS=Homo sapiens OX=9606 GN=YIPF1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005843 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04893 all species →	Yip1	Yip1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006977 all species →	Domain	Yip1 domain	Interproscan
IPR039765 all species →	Family	Protein Yip5/YIPF1/YIPF2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12822 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22940	YIPF1_2; protein YIPF1/2	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.