Gene detail

Detailed information of BRAKERKREP00000026174.1 in Hydra viridissima

Genomic Location: not available for this species
NR annotation: XP_047141637.1, protein HIRA [Hydra vulgaris]
Species abbreviation HVIRI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P79987	Protein HIRA OS=Gallus gallus OX=9031 GN=HIRA PE=1 SV=2
P54198	Protein HIRA OS=Homo sapiens OX=9606 GN=HIRA PE=1 SV=2
Q8QFR2	Protein HIRA OS=Xenopus laevis OX=8355 GN=hira PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004897 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR031120 all species →	Family	WD repeat HIR1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13831 all species →	MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINS	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000417 all species →	Cellular Component	HIR complex	Interproscan
GO:0000790 all species →	Cellular Component	chromatin	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006325 all species →	Biological Process	chromatin organization	Interproscan
GO:0006336 all species →	Biological Process	chromatin organization	Interproscan
GO:0006338 all species →	Biological Process	chromatin remodeling	Interproscan
GO:0006351 all species →	Biological Process	DNA-templated transcription	Interproscan
GO:0031491 all species →	Molecular Function	nucleosome binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKREP00000026174.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.