Detailed information of BRAKERKREP00000027583.1 in Hydra viridissima

Genomic Location: not available for this species
NR annotation: GES82328.1, zinc finger BED domain-containing protein RICESLEEPER 2-like [Rhizophagus clarus]
Species Hydra viridissima · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6AVI0Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1
B9FJG3Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1
Q75HY5Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000431 (this species only)
Transcription factor familyzf-BED · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02892
all species →		zf-BEDBED zinc fingerDomainInterproscan
PF05699
all species →		Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003656
all species →		DomainZinc finger, BED-typeInterproscan
IPR012337
all species →		Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR008906
all species →		DomainHAT, C-terminal dimerisation domainInterproscan
IPR036236
all species →		Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR052035
all species →		FamilyZinc finger BED domain-containingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46481
all species →		ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0046983
all species →		Molecular Functionprotein dimerization activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERKREP00000027583.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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