Gene detail

Detailed information of BRAKERKYLP00000000015.1 in Mastigias papua

Genomic Location: :...
NR annotation: CAH3018037.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERKYLT00000000015

ATGATGTGCAGCACCAAGATGATACGCAGCAATGTTATCAGGATATTTATCAGAACGTGTCAGATAGAGCCATGTCACTTTACAACTTTAACCATCTATGCAGCCGTGGATAGGGAAGCCATAAGGTTTCAAGTTATCATATCCATCAGCATGCCAAAGTCTGAGGTTTTAAATGTGATAAAAGAGAGACAGAAGCTCGATCAGTTATATGAGGAGAATTACAAGAAACAGTCAACACTTTTATGGCAGTACATAGGATCACCTTCTGGTGTCCTAAGCATGTATCCAGCTTACCTATGGGATAACCCAGAAGTAGATCGATATGACTGTAGAAGAAGAGGATGGTATACAGCTGGAGCAAGTTCGCCGAAAGATGTAGTAATCCTTCTCGATCgGAGTGGTAGTATGGTAGGAACAAACTCTAAGATTGCCACTGCTGCTATAACCATCATTATAGAGTCACTGCAGGAGAATGACTTTTTTAATATTGTTTATTTCAACACAAATGCAGATGTCGTTAATGACTGCTACCGTAACCTTGTTCAAGCCAGCAAATCAAACAGAGAGCAAGTTCTCGGGAAAATAAGGACCCTACCAAACCCAAATGGCTACGCAAATGGAATGAAGGCTCTGGAAAAAGCATACAAACTGCTCGAGGAAGCTGGGAAGAGTGAGCACACAAGCTCTGGCTGCCACAAAGTGATTTTTCTTCTCTCAGACGAAATCGAAGATTTCCAAGATATGAAGAAAGTTGTAGAGAAGCATGAAGACATGAAGGTCAGAATCTTCTCCTATCAAATTGGTCGTGGTCGGAAAAAGAGGGAAGCCATGCAGTATATTGCTTGTAAAACATTGGGGAAATTTTTCAAACTGGAAACAATCGGGAGTGCATACGATTTCGTATTGGACTACGTTGAAGTCTTAGGAACACCAATTGCCCTTGATGATAGGAACATATCCAGAGTTCCAATTTACGTGCCGGTATATATTGACTGGGAgACAAAGCTTCCAATATTCTCCGTCGTATTGCCAGTTGTAAGAAATAAGAGTGAGCATCAGGTTACTGGACTGCTAGGCGTTGCAACTCAAGATATCACATTGATTGAGCTTCAAAATACTGTTCCAGTTCATAAGCTTGGGGTGAACGGATATGGTTTCAGCACCAACAATAACGGTTTTATACATTTCCATCGACGGCTTCGTTGGCAAAAGAGAACCGATACATTTGCTCCAACGACGCTGTTATCTGCAGTTGAGAATAACTTTGACAATCAAAGCGACATTCTAGCAAGGCAAATGATTGATCGCAAAACTGGCAATCTCTCAACAAACTCTATACAGATGGCATCGGACGACAAAAGGGAAAGATTGATATTCTCAAAGATGCATTACTTCTACACTCCTGTTTCTAATACACCTTTCAGCtatgttgatgatgaagaaCTCCATTTCAGCGCCGGCATTGGCATGCAAGAGTTTGGGATTACTCAGATATTTCTTGGCAGTAATTTTTCACTCAATTTTTCTAAAGGCGACAAAGAGTTAACTGAGAACTTGTTGCTGTCTGCAGTTACAATTGATGATATTGCAATTCGGTATTGGAATAGATCTAAAAACCTAATGGGTAACAGCTCATATGGAAATGTCGGCAAGAAAAGCATCAGCGAGATTTTCTACTTAAGAGCAGCAACTCTTTACAAGGAACCAAAGCTTCAGTATATTTTTACAAGATTAGATTCCAATGATCCTACAATCATGGCTGTCACTCCAATAGTCATTGGCGAGAAAAGAACAATTGCTGCTGTTGTTGGGTTTACAATGTTTCAAACAACATTGGCTGCTCTGATGAAATCAGCAAGTTCAAGTTCCTACCAGACCACTGGATGCTATATTGTAGATAATGATGGATATATAATCGCTTGGAATAACGAGAACACTTTGGTTGATAATTTCTTCGGTATTCATGAGGGTTTGGTAATGAGACGGTTGATTGATAACAAGATATTTATCAAGTAA

Transcript

BRAKERKYLT00000000015

Protein

Uniprot

Uniprot term	Description
Q7Z3S7	Voltage-dependent calcium channel subunit alpha-2/delta-4 OS=Homo sapiens OX=9606 GN=CACNA2D4 PE=1 SV=2
Q5RJF7	Voltage-dependent calcium channel subunit alpha-2/delta-4 OS=Mus musculus OX=10090 GN=Cacna2d4 PE=2 SV=1
Q8IZS8	Voltage-dependent calcium channel subunit alpha-2/delta-3 OS=Homo sapiens OX=9606 GN=CACNA2D3 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08399	VWA_N	VWA N-terminal	Family	Interproscan
PF13768	VWA_3	von Willebrand factor type A domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051173	Family	Voltage-dependent calcium channel subunit alpha-2/delta	Interproscan
IPR013608	Domain	VWA N-terminal	Interproscan
IPR002035	Domain	von Willebrand factor, type A	Interproscan
IPR036465	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10166	VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005245	Molecular Function	voltage-gated calcium channel activity	Interproscan
GO:0005891	Cellular Component	voltage-gated calcium channel complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19089	cas5a_b_c; CRISPR-associated protein Cas5a/b/c	-	Prokaryotic defense system	ko02048	deepkoala