Gene detail

Detailed information of BRAKERKYLP00000001089.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_002166786.1, 60S ribosomal protein L21 [Hydra vulgaris]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q02753	Large ribosomal subunit protein eL21A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL21A PE=1 SV=1
Q12672	Large ribosomal subunit protein eL21B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL21B PE=1 SV=1
O09167	Large ribosomal subunit protein eL21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006391 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01157 all species →	Ribosomal_L21e	Ribosomal protein L21e	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001147 all species →	Family	Large ribosomal subunit protein eL21	Interproscan
IPR036948 all species →	Homologous_superfamily	Large ribosomal subunit protein eL21 superfamily	Interproscan
IPR008991 all species →	Homologous_superfamily	Translation protein SH3-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20981 all species →	60S RIBOSOMAL PROTEIN L21	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02889	RP-L21e, RPL21; large subunit ribosomal protein L21e	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.